RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 FANCCQ00597 558 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 ARL6IP4Q66PJ3 421 aaKnown RBP20.07■□□□□ 0.8
SSB-201ENST00000260956 PAGE5Q96GU1 130 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 KCND1Q9NSA2 647 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 PCDHA6Q9UN73 950 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 STX8Q9UNK0 236 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 PCDHA8Q9Y5H6 950 aa20.07■□□□□ 0.8
SSB-201ENST00000260956 USP2O75604 605 aaPredicted RBP20.06■□□□□ 0.8
SSB-201ENST00000260956 TNNI2P48788 182 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 DPYDQ12882 1025 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 PDXDC2PQ6P474 469 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 PDILTQ8N807 584 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 MLKLQ8NB16 471 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 RASGRP4Q8TDF6 673 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 ZMYND12Q9H0C1 365 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 INTS13Q9NVM9 706 aa20.06■□□□□ 0.8
SSB-201ENST00000260956 ATRNL1Q5VV63 1379 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 KLRF2D3W0D1 207 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 ENTPD3O75355 529 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 HUNKP57058 714 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 MIGA2Q7L4E1 593 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 C2orf69Q8N8R5 385 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 CCDC148Q8NFR7 591 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 SMARCE1Q969G3 411 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 MTMR4Q9NYA4 1195 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 RASSF10A6NK89 507 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 GSDMDP57764 484 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 SUPT20HL1Q3ZLR7 823 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 ARMCX5Q6P1M9 558 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 ENOX1Q8TC92 643 aaKnown RBP20.05■□□□□ 0.8
SSB-201ENST00000260956 DHX58Q96C10 678 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 MTRQ99707 1265 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 CPVLQ9H3G5 476 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 RIOX1Q9H6W3 641 aa20.05■□□□□ 0.8
SSB-201ENST00000260956 VWA3AA6NCI4 1184 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 NPM3O75607 178 aaKnown RBP20.04■□□□□ 0.8
SSB-201ENST00000260956 PARP1P09874 1014 aaKnown RBP20.04■□□□□ 0.8
SSB-201ENST00000260956 GOLGA8HP0CJ92 632 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 AKR1B1P15121 316 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 SHMT1P34896 483 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 TPM4P67936 248 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 CUL4BQ13620 913 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 MYH4Q9Y623 1939 aa20.04■□□□□ 0.8
SSB-201ENST00000260956 ESYT2A0FGR8 921 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 PDHBP11177 359 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 MCM7P33993 719 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 CT47A1Q5JQC4 288 aaPredicted RBP20.03■□□□□ 0.8
SSB-201ENST00000260956 LDLRAD1Q5T700 205 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 CYP4F22Q6NT55 531 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 USP17L2Q6R6M4 530 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 PRIMPOLQ96LW4 560 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 FANCLQ9NW38 375 aa20.03■□□□□ 0.8
SSB-201ENST00000260956 VEGFBP49765 207 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 TTLL12Q14166 644 aaPredicted RBP20.02■□□□□ 0.8
SSB-201ENST00000260956 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 HEATR3Q7Z4Q2 680 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 FILIP1Q7Z7B0 1213 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 CLMNQ96JQ2 1002 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 CSRNP1Q96S65 589 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 EHD4Q9H223 541 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 TMEM60Q9H2L4 133 aa20.02■□□□□ 0.8
SSB-201ENST00000260956 USP17L5A8MUK1 530 aa20.02■□□□□ 0.79
SSB-201ENST00000260956 SMC2O95347 1197 aa20.02■□□□□ 0.79
SSB-201ENST00000260956 ERCC5P28715 1186 aaPredicted RBP20.02■□□□□ 0.79
SSB-201ENST00000260956 NF2P35240 595 aa20.02■□□□□ 0.79
SSB-201ENST00000260956 GTF2F1P35269 517 aaKnown RBP eCLIP20.02■□□□□ 0.79
SSB-201ENST00000260956 LONP1P36776 959 aaKnown RBP20.02■□□□□ 0.79
SSB-201ENST00000260956 FKBP1BP68106 108 aa20.02■□□□□ 0.79
SSB-201ENST00000260956 MYRIPQ8NFW9 859 aa20.02■□□□□ 0.79
SSB-201ENST00000260956 SWAP70Q9UH65 585 aa20.02■□□□□ 0.79
SSB-201ENST00000260956 PAPPA2Q9BXP8 1791 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 FAM196BA6NMK8 535 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 CD44P16070 742 aaKnown RBP20.01■□□□□ 0.79
SSB-201ENST00000260956 KCNJ6P48051 423 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 APTXQ7Z2E3 356 aaKnown RBP20.01■□□□□ 0.79
SSB-201ENST00000260956 VSTM4Q8IW00 320 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 ZSCAN29Q8IWY8 852 aaPredicted RBP20.01■□□□□ 0.79
SSB-201ENST00000260956 CCDC150Q8NCX0 1101 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 ZIC5Q96T25 663 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 DNAJC18Q9H819 358 aa20.01■□□□□ 0.79
SSB-201ENST00000260956 UQCRHLA0A096LP55 91 aa20■□□□□ 0.79
SSB-201ENST00000260956 UQCRHP07919 91 aa20■□□□□ 0.79
SSB-201ENST00000260956 CASP1P29466 404 aa20■□□□□ 0.79
SSB-201ENST00000260956 PPP1R3FQ6ZSY5 799 aaPredicted RBP20■□□□□ 0.79
SSB-201ENST00000260956 TMC6Q7Z403 805 aa20■□□□□ 0.79
SSB-201ENST00000260956 KLRG1Q96E93 195 aa20■□□□□ 0.79
SSB-201ENST00000260956 GSDMAQ96QA5 445 aa20■□□□□ 0.79
SSB-201ENST00000260956 DACH1Q9UI36 760 aa20■□□□□ 0.79
SSB-201ENST00000260956 SERPINB13Q9UIV8 391 aa20■□□□□ 0.79
SSB-201ENST00000260956 FAM155AB1AL88 458 aaPredicted RBP19.99■□□□□ 0.79
SSB-201ENST00000260956 PPP1R12BO60237 982 aaPredicted RBP19.99■□□□□ 0.79
SSB-201ENST00000260956 SKILP12757 684 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 PRPHP41219 470 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 MAP3K10Q02779 954 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 GRM1Q13255 1194 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 INF2Q27J81 1249 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 ASPRV1Q53RT3 343 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 NAALADL2Q58DX5 795 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 CLEC10AQ8IUN9 316 aa19.99■□□□□ 0.79
SSB-201ENST00000260956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.99■□□□□ 0.798e-11■■■■□ 25.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms