RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 NBPF5PQ86XG9 351 aaPredicted RBP16.45■□□□□ 0.22
KCTD3-201ENST00000259154 NCAPGQ9BPX3 1015 aa16.45■□□□□ 0.22
KCTD3-201ENST00000259154 KIF5BP33176 963 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 CXorf56Q9H5V9 222 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 BAZ2BQ9UIF8 2168 aaKnown RBP16.44■□□□□ 0.22
KCTD3-201ENST00000259154 TTC26A0AVF1 554 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 CD248Q9HCU0 757 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 CUL4BQ13620 913 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 TUBB2AQ13885 445 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 TUBB2BQ9BVA1 445 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 AP1M1Q9BXS5 423 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 GREM2Q9H772 168 aa16.44■□□□□ 0.22
KCTD3-201ENST00000259154 RPN1P04843 607 aaKnown RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 EXOSC10Q01780 885 aaKnown RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 TBC1D1Q86TI0 1168 aaPredicted RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 MLXIPLQ9NP71 852 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 TNKSO95271 1327 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 BMP15O95972 392 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 KLHL30Q0D2K2 578 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 CAPN12Q6ZSI9 719 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 TSPY3P0CV98 308 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 TSPY8P0CW00 308 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 KCNQ4P56696 695 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 CPSF2Q9P2I0 782 aaKnown RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
KCTD3-201ENST00000259154 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
KCTD3-201ENST00000259154 CCDC160A6NGH7 325 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 PAGE5Q96GU1 130 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 PRM3Q9NNZ6 103 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 PPP6R2O75170 966 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 NR1D1P20393 614 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 TECP42680 631 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 TRIM14Q14142 442 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 SNCBQ16143 134 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 SLC9C1Q4G0N8 1177 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 BEND6Q5SZJ8 279 aaPredicted RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 TRIM65Q6PJ69 517 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 TBC1D10CQ8IV04 446 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 TRIM58Q8NG06 486 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 NOVA2Q9UNW9 492 aaKnown RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 HYOU1Q9Y4L1 999 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 POLR2FP61218 127 aaKnown RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 RPS6KA1Q15418 735 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 LRRC1Q9BTT6 524 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 NHEJ1Q9H9Q4 299 aaPredicted RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
KCTD3-201ENST00000259154 DUSP10Q9Y6W6 482 aa16.42■□□□□ 0.22
KCTD3-201ENST00000259154 PP2D1A8MPX8 630 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 F8W031 263 aaPredicted RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 ANTXR2P58335 489 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 APBA1Q02410 837 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 UBAP1LF5GYI3 381 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 SKAP2O75563 359 aaPredicted RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 MCAMP43121 646 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 AATFQ9NY61 560 aaKnown RBP eCLIP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■□□□□ 10.7
KCTD3-201ENST00000259154 EIF4A3P38919 411 aaKnown RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 ERFP50548 548 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 RDH13Q8NBN7 331 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 COG1Q8WTW3 980 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 MS4A14Q96JA4 679 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 CNOT6LQ96LI5 555 aaKnown RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 DNAJC17Q9NVM6 304 aaKnown RBP16.41■□□□□ 0.22
KCTD3-201ENST00000259154 ZBTB1Q9Y2K1 713 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 JCADQ9P266 1359 aa16.41■□□□□ 0.22
KCTD3-201ENST00000259154 BCAMP50895 628 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 NEDD9Q14511 834 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 GKAP1Q5VSY0 366 aaPredicted RBP16.4■□□□□ 0.22
KCTD3-201ENST00000259154 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 HPS3Q969F9 1004 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 PARP4Q9UKK3 1724 aaKnown RBP16.4■□□□□ 0.22
KCTD3-201ENST00000259154 USP17L12C9JPN9 530 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 USP17L21D6R901 530 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 MYBL1P10243 752 aa16.4■□□□□ 0.22
KCTD3-201ENST00000259154 ZBTB16Q05516 673 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms