RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 DHX58Q96C10 678 aa12.94□□□□□ -0.34
CLUHP3-201ENST00000254109 WRNIP1Q96S55 665 aa12.94□□□□□ -0.34
CLUHP3-201ENST00000254109 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
CLUHP3-201ENST00000254109 PCDHA4Q9UN74 947 aa12.94□□□□□ -0.34
CLUHP3-201ENST00000254109 MTMR7Q9Y216 660 aa12.94□□□□□ -0.34
CLUHP3-201ENST00000254109 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
CLUHP3-201ENST00000254109 PALM3A6NDB9 673 aaPredicted RBP12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 NRDCO43847 1150 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 SLFN14P0C7P3 912 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 SKILP12757 684 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 SARSP49591 514 aaKnown RBP12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 CCDC150Q8NCX0 1101 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 SYMPKQ92797 1274 aaKnown RBP12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 ZNF408Q9H9D4 720 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 ZNF112Q9UJU3 913 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
CLUHP3-201ENST00000254109 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 MCM7P33993 719 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 NOVP48745 357 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 UBASH3AP57075 661 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 MORC3Q14149 939 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 USP49Q70CQ1 688 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 RASGRP2Q7LDG7 609 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 TMC6Q7Z403 805 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 LRRC47Q8N1G4 583 aaKnown RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 EPSTI1Q96J88 318 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 DYNC1I1O14576 645 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 CTNND1O60716 968 aaKnown RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 TTLL1O95922 423 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 PARP1P09874 1014 aaKnown RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 ICA1Q05084 483 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 TPD52L1Q16890 204 aaPredicted RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 HEATR3Q7Z4Q2 680 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 MYRIPQ8NFW9 859 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 GPKOWQ92917 476 aaPredicted RBP eCLIP12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 KANSL2Q9H9L4 492 aa12.92□□□□□ -0.34
CLUHP3-201ENST00000254109 DOCK1Q14185 1865 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 A0A1W2PRG0 241 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 KLRF2D3W0D1 207 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 KIF3CO14782 793 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 NF2P35240 595 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 TXLNAP40222 546 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 ECE1P42892 770 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 ARID5BQ14865 1188 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 ARL6IP4Q66PJ3 421 aaKnown RBP12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 DAGLBQ8NCG7 672 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.91□□□□□ -0.348e-6■■□□□ 11.7
CLUHP3-201ENST00000254109 ENOX1Q8TC92 643 aaKnown RBP12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 ACER1Q8TDN7 264 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 CCDC12Q8WUD4 166 aaPredicted RBP12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 FANCLQ9NW38 375 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 BARHL2Q9NY43 387 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 OTOFQ9HC10 1997 aa12.91□□□□□ -0.34
CLUHP3-201ENST00000254109 WNT7AO00755 349 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 ASNSP08243 561 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 ATP1A3P13637 1013 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 BMP6P22004 513 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 SFPQP23246 707 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 SMARCA1P28370 1054 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 AFMP43652 599 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 WWC2Q6AWC2 1192 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 SPATA20Q8TB22 786 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 HSD3B7Q9H2F3 369 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 STXBP3O00186 592 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 RAD21O60216 631 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 ITGBL1O95965 494 aaPredicted RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 CDK11BP21127 795 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 ERCC5P28715 1186 aaPredicted RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 CCZ1BP86790 482 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 CCZ1P86791 482 aaPredicted RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 VGLL4Q14135 290 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 GSDMAQ96QA5 445 aa12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
CLUHP3-201ENST00000254109 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 A0A087X0B3 334 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 CYTH3O43739 400 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 PTPRAP18433 802 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 YY1P25490 414 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms