RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CNNM4Q6P4Q7 775 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 EP400NLQ6ZTU2 488 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 ARFGAP2Q8N6H7 521 aa12.15□□□□□ -0.46
COPA-201ENST00000241704 MARCH10Q8NA82 808 aaPredicted RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
COPA-201ENST00000241704 UTYO14607 1347 aa12.15□□□□□ -0.47
COPA-201ENST00000241704 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 NT5C2P49902 561 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 CALCRLQ16602 461 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 FAM53CQ9NYF3 392 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 GOLGA6L10A0A0M3HER8 536 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 ELF1P32519 619 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 RCOR1Q9UKL0 485 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 IRX1P78414 480 aaPredicted RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 MAATS1Q7Z4T9 603 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 ZNF34Q8IZ26 560 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 SNX29Q8TEQ0 813 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 DYDC1Q8WWB3 177 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 R3HDM1Q15032 1099 aaKnown RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 FBXW10Q5XX13 1052 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 LRRN4CLQ8ND94 238 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 FOXP1Q9H334 677 aaPredicted RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
COPA-201ENST00000241704 LUC7L2Q9Y383 392 aaKnown RBP12.14□□□□□ -0.47
COPA-201ENST00000241704 BUB1BO60566 1050 aaPredicted RBP12.13□□□□□ -0.47
COPA-201ENST00000241704 KIF4AO95239 1232 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 CSF1RP07333 972 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 TBC1D5Q92609 795 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 RPGRIP1Q96KN7 1286 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 GDAP1L1Q96MZ0 367 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 CCDC169A6NNP5 214 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 SASH3O75995 380 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 RPL13P26373 211 aaKnown RBP12.13□□□□□ -0.47
COPA-201ENST00000241704 SMTNP53814 917 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 SLC39A14Q15043 492 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 LRRC31Q6UY01 552 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 LRRC47Q8N1G4 583 aaKnown RBP12.13□□□□□ -0.47
COPA-201ENST00000241704 IGSF22Q8N9C0 903 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 GLG1Q92896 1179 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 COA1Q9GZY4 146 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 KCND1Q9NSA2 647 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 H3BQF6 201 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 GNPTABQ3T906 1256 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
COPA-201ENST00000241704 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 CABP7Q86V35 215 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 VSTM4Q8IW00 320 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 IFT74Q96LB3 600 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 CTNND2Q9UQB3 1225 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 NFE2L3Q9Y4A8 694 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 CCNA1P78396 465 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 RESTQ13127 1097 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 RBM43Q6ZSC3 357 aaKnown RBP12.13□□□□□ -0.47
COPA-201ENST00000241704 NLRX1Q86UT6 975 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 CLIC4Q9Y696 253 aa12.13□□□□□ -0.47
COPA-201ENST00000241704 KRT83P78385 493 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 PAK1Q13153 545 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 TOB2Q14106 344 aaPredicted RBP12.12□□□□□ -0.47
COPA-201ENST00000241704 HNRNPLLQ8WVV9 542 aaKnown RBP12.12□□□□□ -0.47
COPA-201ENST00000241704 KIF20BQ96Q89 1820 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 M0QZ92 97 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 TRAF5O00463 557 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 PEX19P40855 299 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 CFAP58Q5T655 872 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 CCDC42Q96M95 316 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 SPATA31A5Q5VU36 1347 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 SPATA31A7Q8IWB4 1347 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
COPA-201ENST00000241704 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 SND1Q7KZF4 910 aaKnown RBP eCLIP12.12□□□□□ -0.477e-7■■□□□ 11.7
COPA-201ENST00000241704 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.471e-6■■■□□ 16.8
COPA-201ENST00000241704 BPIFA3Q9BQP9 254 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms