RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 RPN1P04843 607 aaKnown RBP16.3■□□□□ 0.2
PRKAB1-201ENST00000229328 SLC1A4P43007 532 aa16.3■□□□□ 0.2
PRKAB1-201ENST00000229328 ABCB5Q2M3G0 1257 aa16.3■□□□□ 0.2
PRKAB1-201ENST00000229328 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
PRKAB1-201ENST00000229328 SYNRGQ9UMZ2 1314 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 GOLGA8FQ08AF8 430 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 GOLGA8DPQ0D2H9 430 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 C16orf45Q96MC5 204 aaPredicted RBP16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 GMLQ99445 158 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 PSMD1Q99460 953 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 GH2P01242 217 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 TNNI2P48788 182 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 PPP4R3BQ5MIZ7 849 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 SPATA1Q5VX52 437 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 PPP1R18Q6NYC8 613 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 CABP7Q86V35 215 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 CTNND2Q9UQB3 1225 aa16.29■□□□□ 0.2
PRKAB1-201ENST00000229328 VIL1P09327 827 aaKnown RBP16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 PLCG1P19174 1290 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 TXKP42681 527 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 CT47A1Q5JQC4 288 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 DCAF4Q8WV16 495 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 MTMR9Q96QG7 549 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 UQCRHLA0A096LP55 91 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 F5H6K3 240 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 UQCRHP07919 91 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 TPM2P07951 284 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 SNAP25P60880 206 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 KLRC3Q07444 240 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 HSP90AA2PQ14568 343 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 APTXQ7Z2E3 356 aaKnown RBP16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 AK8Q96MA6 479 aa16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 MMTAG2Q9BU76 263 aaKnown RBP16.28■□□□□ 0.2
PRKAB1-201ENST00000229328 PSME4Q14997 1843 aa16.27■□□□□ 0.2
PRKAB1-201ENST00000229328 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-201ENST00000229328 CUL5Q93034 780 aa16.27■□□□□ 0.2
PRKAB1-201ENST00000229328 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
PRKAB1-201ENST00000229328 MAPK8IP1Q9UQF2 711 aa16.27■□□□□ 0.2
PRKAB1-201ENST00000229328 CALCRLQ16602 461 aa16.27■□□□□ 0.19
PRKAB1-201ENST00000229328 ZNF658Q5TYW1 1059 aaPredicted RBP16.27■□□□□ 0.19
PRKAB1-201ENST00000229328 IGSF22Q8N9C0 903 aa16.27■□□□□ 0.19
PRKAB1-201ENST00000229328 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.19
PRKAB1-201ENST00000229328 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.19
PRKAB1-201ENST00000229328 A0A1W2PRG0 241 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 KLRC4O43908 158 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 NDUFB10O96000 172 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 CDC37Q16543 378 aaPredicted RBP16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 RBM26Q5T8P6 1007 aaKnown RBP16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 CDAN1Q8IWY9 1227 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 ORC2Q13416 577 aaPredicted RBP16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 NR1I3Q14994 352 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
PRKAB1-201ENST00000229328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.26■□□□□ 0.192e-9■■■■■ 61.2
PRKAB1-201ENST00000229328 PRCPP42785 496 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 DLGAP5Q15398 846 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 KMT5BQ4FZB7 885 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 GJA10Q969M2 543 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 RMND1Q9NWS8 449 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 PCDHA1Q9Y5I3 950 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 TEX33O43247 280 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 TAL1P17542 331 aaPredicted RBP16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 GMCL1P1Q8NEA9 526 aa16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
PRKAB1-201ENST00000229328 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 A0A1B0GTH6 734 aa16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 TBX2Q13207 712 aaPredicted RBP16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 E4F1Q66K89 784 aaPredicted RBP16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 CCAR2Q8N163 923 aaKnown RBP16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 NELFBQ8WX92 580 aa16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 PRIMPOLQ96LW4 560 aa16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 TMOD2Q9NZR1 351 aa16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 POTEMA6NI47 508 aa16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 TNNT1P13805 278 aa16.24■□□□□ 0.19
PRKAB1-201ENST00000229328 PAK1Q13153 545 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms