RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 NFIBO00712 420 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 ZBTB5O15062 677 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 HOXC6P09630 235 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 ZNF792Q3KQV3 632 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 FBXO11Q86XK2 927 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 PXYLP1Q8TE99 480 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 ARMC5Q96C12 935 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 DDX11Q96FC9 970 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 PURBQ96QR8 312 aaKnown RBP16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 SPZ1Q9BXG8 430 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 ACAD9Q9H845 621 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 A1CFQ9NQ94 594 aaKnown RBP16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 BIN2Q9UBW5 565 aaPredicted RBP16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 FBXO40Q9UH90 709 aa16.73■□□□□ 0.27
SUPT4H1-201ENST00000225504 SMARCA1P28370 1054 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 GNAQP50148 359 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 NEK4P51957 841 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 CCT2P78371 535 aaKnown RBP16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 CNTN2Q02246 1040 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 FUT2Q10981 343 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 RTN1Q16799 776 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 ANKRD35Q8N283 1001 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 SLAIN1Q8ND83 568 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 APBA2Q99767 749 aa16.72■□□□□ 0.27
SUPT4H1-201ENST00000225504 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 IGHA2P01877 340 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 INHAP05111 366 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 AK2P54819 239 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 MTFR1Q15390 333 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 NSMFQ6X4W1 530 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 ZNF333Q96JL9 665 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 FGD4Q96M96 766 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 LZTS2Q9BRK4 669 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 ALDH8A1Q9H2A2 487 aaPredicted RBP16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 CENPFP49454 3210 aa16.71■□□□□ 0.27
SUPT4H1-201ENST00000225504 MYH6P13533 1939 aa16.71■□□□□ 0.26
SUPT4H1-201ENST00000225504 CCDC85CA6NKD9 419 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 OPLAHO14841 1288 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 PPFIA3O75145 1194 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 CYP2C19P33261 490 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 MAML3Q96JK9 1138 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 AMNQ9BXJ7 453 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 TPCN1Q9ULQ1 816 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 PCDHA1Q9Y5I3 950 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 DDX49Q9Y6V7 483 aaKnown RBP16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 ZNF236Q9UL36 1845 aa16.7■□□□□ 0.26
SUPT4H1-201ENST00000225504 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 CACNB2Q08289 660 aaPredicted RBP16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 STK3Q13188 491 aa16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 PRAMEF19Q5SWL8 479 aa16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 NOL8Q76FK4 1167 aaKnown RBP16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 RRP36Q96EU6 259 aaKnown RBP16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 ZNF274Q96GC6 653 aaPredicted RBP16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 RBM28Q9NW13 759 aaKnown RBP16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 V9GY48 417 aaPredicted RBP16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 ASTN1O14525 1302 aa16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 ABCB11O95342 1321 aa16.69■□□□□ 0.26
SUPT4H1-201ENST00000225504 DTNBO60941 627 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 HMGCRP04035 888 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 RCAN1P53805 252 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 SLC30A10Q6XR72 485 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 PNMA2Q9UL42 364 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 DIS3Q9Y2L1 958 aaKnown RBP16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 PLXNA1Q9UIW2 1896 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
SUPT4H1-201ENST00000225504 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 CCL5P13501 91 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 CALML3P27482 149 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 NTRK3Q16288 839 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 RNF207Q6ZRF8 634 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 TRPV1Q8NER1 839 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 MRPL11Q9Y3B7 192 aaKnown RBP16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 LARGE1O95461 756 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 MAP3K21Q5TCX8 1036 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 OLFML2BQ68BL8 750 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 TRMT44Q8IYL2 757 aaKnown RBP16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
SUPT4H1-201ENST00000225504 NID2Q14112 1375 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 PFASO15067 1338 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 CAPN15O75808 1086 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 CCND3P30281 292 aaPredicted RBP16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 UBXN2AP68543 259 aa16.66■□□□□ 0.26
SUPT4H1-201ENST00000225504 PPP2R5BQ15173 497 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms