RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 CCDC196A0A1B0GTZ2 297 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 SPDYE16A6NNV3 312 aaPredicted RBP19.04■□□□□ 0.64
LIM2-201ENST00000221973 GNAQP50148 359 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 TMTC3Q6ZXV5 915 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 FAM160B2Q86V87 743 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 SNX21Q969T3 373 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 TMX3Q96JJ7 454 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 SLF1Q9BQI6 1058 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 VAT1LQ9HCJ6 419 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
LIM2-201ENST00000221973 NID2Q14112 1375 aa19.04■□□□□ 0.64
LIM2-201ENST00000221973 DHX16O60231 1041 aaKnown RBP19.03■□□□□ 0.64
LIM2-201ENST00000221973 RGS2P41220 211 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 COG2Q14746 738 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 PPP2R5BQ15173 497 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 SYDE2Q5VT97 1194 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 LHX8Q68G74 356 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 BTNL9Q6UXG8 535 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 CCDC83Q8IWF9 413 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 HSCBQ8IWL3 235 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
LIM2-201ENST00000221973 GTF3C6Q969F1 213 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 APBA2Q99767 749 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 LZTS2Q9BRK4 669 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 PPP1R9AQ9ULJ8 1098 aa19.03■□□□□ 0.64
LIM2-201ENST00000221973 PFASO15067 1338 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 CPLX1O14810 134 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 PLA2G6O60733 806 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 IGHA2P01877 340 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 CCND3P30281 292 aaPredicted RBP19.02■□□□□ 0.64
LIM2-201ENST00000221973 DSG3P32926 999 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 SNAP25P60880 206 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 MAP2K5Q13163 448 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 SLC35G1Q2M3R5 365 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 TRMT44Q8IYL2 757 aaKnown RBP19.02■□□□□ 0.64
LIM2-201ENST00000221973 ADGRF4Q8IZF3 695 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 PRPF38AQ8NAV1 312 aaKnown RBP19.02■□□□□ 0.64
LIM2-201ENST00000221973 PIBF1Q8WXW3 757 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 ATG4CQ96DT6 458 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 FLRT1Q9NZU1 646 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 PRR12Q9ULL5 1215 aa19.02■□□□□ 0.64
LIM2-201ENST00000221973 COL6A3P12111 3177 aa19.01■□□□□ 0.63
LIM2-201ENST00000221973 K7ELQ4 463 aaPredicted RBP19.01■□□□□ 0.63
LIM2-201ENST00000221973 CYTH3O43739 400 aa19.01■□□□□ 0.63
LIM2-201ENST00000221973 DTNBO60941 627 aa19.01■□□□□ 0.63
LIM2-201ENST00000221973 PPFIA3O75145 1194 aa19.01■□□□□ 0.63
LIM2-201ENST00000221973 ST3GAL1Q11201 340 aa19.01■□□□□ 0.63
LIM2-201ENST00000221973 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
LIM2-201ENST00000221973 COL6A1P12109 1028 aa19■□□□□ 0.63
LIM2-201ENST00000221973 PTPREP23469 700 aa19■□□□□ 0.63
LIM2-201ENST00000221973 CCNA1P78396 465 aa19■□□□□ 0.63
LIM2-201ENST00000221973 CPLX2Q6PUV4 134 aaKnown RBP19■□□□□ 0.63
LIM2-201ENST00000221973 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
LIM2-201ENST00000221973 JMJD4Q9H9V9 463 aa19■□□□□ 0.63
LIM2-201ENST00000221973 A0A0G2JMZ2 1700 aa19■□□□□ 0.63
LIM2-201ENST00000221973 SLC15A5A6NIM6 579 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 HOXC6P09630 235 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 SMARCA1P28370 1054 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 FUT2Q10981 343 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 GRB14Q14449 540 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 NTRK3Q16288 839 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 HOMER1Q86YM7 354 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 NPLOC4Q8TAT6 608 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 PHKBQ93100 1093 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 GDF15Q99988 308 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 SPZ1Q9BXG8 430 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 CTDP1Q9Y5B0 961 aaPredicted RBP18.99■□□□□ 0.63
LIM2-201ENST00000221973 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
LIM2-201ENST00000221973 LAMA2P24043 3122 aaKnown RBP18.98■□□□□ 0.63
LIM2-201ENST00000221973 hCG_1642624A0A1W2PR95 340 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 VWA5AO00534 786 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
LIM2-201ENST00000221973 ZBED4O75132 1171 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 CTDNEP1O95476 244 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 IFNAR1P17181 557 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 CCDC174Q6PII3 467 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 C7orf61Q8IZ16 206 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 RRP36Q96EU6 259 aaKnown RBP18.98■□□□□ 0.63
LIM2-201ENST00000221973 PIGSQ96S52 555 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 SLC26A6Q9BXS9 759 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 ADAMTS5Q9UNA0 930 aa18.98■□□□□ 0.63
LIM2-201ENST00000221973 RBM19Q9Y4C8 960 aaKnown RBP18.98■□□□□ 0.63
LIM2-201ENST00000221973 V9GY48 417 aaPredicted RBP18.98■□□□□ 0.63
LIM2-201ENST00000221973 FRMPD3Q5JV73 1810 aa18.97■□□□□ 0.63
LIM2-201ENST00000221973 A0A1W2PPC1 479 aa18.97■□□□□ 0.63
LIM2-201ENST00000221973 CDKL5O76039 1030 aa18.97■□□□□ 0.63
LIM2-201ENST00000221973 SSRP1Q08945 709 aaKnown RBP18.97■□□□□ 0.63
LIM2-201ENST00000221973 CDC37Q16543 378 aaPredicted RBP18.97■□□□□ 0.63
LIM2-201ENST00000221973 CPXCR1Q8N123 301 aa18.97■□□□□ 0.63
LIM2-201ENST00000221973 NSUN7Q8NE18 718 aaKnown RBP18.97■□□□□ 0.63
LIM2-201ENST00000221973 MOV10L1Q9BXT6 1211 aaKnown RBP18.97■□□□□ 0.63
LIM2-201ENST00000221973 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
LIM2-201ENST00000221973 SLC38A10Q9HBR0 1119 aa18.97■□□□□ 0.63
LIM2-201ENST00000221973 ZMYND8Q9ULU4 1186 aaPredicted RBP18.97■□□□□ 0.63
LIM2-201ENST00000221973 PARP14Q460N5 1801 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 JAK2O60674 1132 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 ANP32AP39687 249 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms