RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 C2orf54Q08AI8 447 aa12.77□□□□□ -0.36
DNMT3B-201ENST00000201963 ZYXQ15942 572 aaKnown RBP12.77□□□□□ -0.36
DNMT3B-201ENST00000201963 TBC1D10BQ4KMP7 808 aaPredicted RBP12.77□□□□□ -0.36
DNMT3B-201ENST00000201963 TBC1D31Q96DN5 1066 aa12.77□□□□□ -0.36
DNMT3B-201ENST00000201963 MAGEB6P1A0A0J9YX57 407 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 CLTAP09496 248 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 ADORA1P30542 326 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 PCK1P35558 622 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 DNM2P50570 870 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 VSNL1P62760 191 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 NR5A1Q13285 461 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 PDCLQ13371 301 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 GSPT2Q8IYD1 628 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 LRRC27Q9C0I9 530 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 SCAF8Q9UPN6 1271 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 FHOD1Q9Y613 1164 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 TMEM110-MUSTN1A8MSY1 372 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 CYP27A1Q02318 531 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 KRT79Q5XKE5 535 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 SYMPKQ92797 1274 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 PANX2Q96RD6 677 aa12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
DNMT3B-201ENST00000201963 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 PHKA1P46020 1223 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 GSTO1P78417 241 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 FMNL3Q8IVF7 1028 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 STMN4Q9H169 189 aaPredicted RBP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 TAF6LQ9Y6J9 622 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 BCL9O00512 1426 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 FAM170AA1A519 330 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 GNAQP50148 359 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 SLC7A5Q01650 507 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 ZNF654Q8IZM8 581 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 MTRF1LQ9UGC7 380 aaKnown RBP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 FMN2Q9NZ56 1722 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 LRP6O75581 1613 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 PPP2R5AQ15172 486 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 RPS6KA1Q15418 735 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 CIAPIN1Q6FI81 312 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 DAAM2Q86T65 1068 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 SPATS2Q86XZ4 545 aaKnown RBP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 LTBP4Q8N2S1 1624 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 NDUFA10O95299 355 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 GKAP1Q5VSY0 366 aaPredicted RBP12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 GSDMAQ96QA5 445 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 BEGAINQ9BUH8 593 aa12.76□□□□□ -0.37
DNMT3B-201ENST00000201963 MFAP3LO75121 409 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 NEDD9Q14511 834 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 CCDC84Q86UT8 332 aaPredicted RBP12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 OSBP2Q969R2 916 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 ABT1Q9ULW3 272 aaKnown RBP12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 MROH5Q6ZUA9 1318 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 TEX33O43247 280 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 TSPY3P0CV98 308 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 TSPY8P0CW00 308 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 CASP1P29466 404 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 PTGDRQ13258 359 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 SNCBQ16143 134 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 SV2BQ7L1I2 683 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 DYMQ7RTS9 669 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 CCDC170Q8IYT3 715 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 PRM3Q9NNZ6 103 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 PDE8BO95263 885 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 GGCXP38435 758 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 MAPKAPK5Q8IW41 473 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 IFT74Q96LB3 600 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
DNMT3B-201ENST00000201963 TBC1D8O95759 1140 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 ZBTB16Q05516 673 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 CETN1Q12798 172 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 NNTQ13423 1086 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 WDR66Q8TBY9 1149 aa12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 N4BP2L2Q92802 583 aaPredicted RBP12.74□□□□□ -0.37
DNMT3B-201ENST00000201963 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms