RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Tmem192Q9CXT7 266 aa12.61□□□□□ -0.39
Lig1-211ENSMUST00000177588 VirmaA2AIV2 1811 aaKnown RBP12.61□□□□□ -0.39
Lig1-211ENSMUST00000177588 Nup98Q6PFD9 1816 aaKnown RBP12.61□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ddx23D3Z0M9 819 aaKnown RBP12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Sema3fO88632 785 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Tmtc1Q3UV71 942 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Sco1Q5SUC9 284 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Slc9a1Q61165 820 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Gimap7Q8R379 293 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Usp15Q8R5H1 981 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Sh3bp5lQ99LH9 392 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Mmtag2Q99LX5 260 aaKnown RBP12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Trap1Q9CQN1 706 aaKnown RBP12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 MymkQ9D1N4 221 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ipo7Q9EPL8 1038 aaKnown RBP12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Nfu1Q9QZ23 255 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Pcdh11xF6ZNL5 1338 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Apol7aB2RT54 418 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 RaraP11416 462 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ppp1r21Q3TDD9 780 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 D130040H23RikQ8BII3 405 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Znf131Q8K3J5 619 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Erlin1Q91X78 346 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 St5Q924W7 1134 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Clstn1Q9EPL2 979 aa12.6□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ankrd63A2ARS0 390 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Etnk2A7MCT6 385 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Krt78E9Q0F0 1068 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Mapkapk5O54992 473 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Hmgb2P30681 210 aaKnown RBP12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Capza3P70190 299 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Maip1Q8BHE8 291 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Peg12Q9WVA7 283 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Aox3G3X982 1335 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Rasa2P58069 847 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Rhbdl3P58873 404 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Rc3h1Q4VGL6 1130 aaKnown RBP12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ezh2Q61188 746 aaKnown RBP12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Rbm15bQ6PHZ5 887 aaKnown RBP12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Strip1Q8C079 837 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Exoc1Q8R3S6 894 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Letm1Q9Z2I0 738 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Myh4Q5SX39 1939 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ccdc88aQ5SNZ0 1873 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Arfgef1G3X9K3 1846 aaKnown RBP12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Ly75Q60767 1723 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Gfpt1P47856 697 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Gngt1Q61012 74 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Usp50Q6P8X6 390 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Kdm1aQ6ZQ88 853 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Prl7b1Q8CGZ9 251 aa12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 Mmgt1Q8K273 131 aaKnown RBP12.59□□□□□ -0.39
Lig1-211ENSMUST00000177588 JcadQ5DTX6 1320 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tex13cD3YU32 604 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 C2cd2E9Q3C1 696 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Aknad1E9Q8N6 675 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 NpcdF8VQB8 469 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tuft1O08970 390 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 NfixP70257 488 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Surf6P70279 355 aaKnown RBP12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Slc9a2Q3ZAS0 814 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 PnocQ64387 187 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Gpbp1Q6NXH3 473 aaKnown RBP12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cdk17Q8K0D0 523 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Rpf2Q9JJ80 306 aaKnown RBP12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Klra17Q9JMA4 273 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 E9QMW4 1145 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Pip4k2aO70172 405 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Stx8O88983 236 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nap1l1P28656 391 aaKnown RBP12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Krit1Q6S5J6 736 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ccp110Q7TSH4 1004 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Zfp446Q8C9M8 523 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 LgsnQ8CIX8 563 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Spats2Q8K1N4 545 aaKnown RBP12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ushbp1Q8R370 680 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Syce1Q9D495 329 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 AvenQ9D9K3 342 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Prl2c5Q9JLV9 222 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Angptl3Q9R182 455 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Sorbs3Q9R1Z8 733 aa12.58□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nr1i2O54915 431 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Il27raO70394 623 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Prl2c3P04768 224 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Zfp781Q0P5U5 243 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Fam83bQ0VBM2 1012 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 SfswapQ3USH5 945 aaKnown RBP12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Bbof1Q3V079 533 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Lrrc15Q80X72 579 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Hirip3Q8BLH7 601 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Def6Q8C2K1 630 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Atp1a1Q8VDN2 1023 aaKnown RBP12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Grin3bQ91ZU9 1003 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 AllcQ9JHX6 414 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Pex3Q9QXY9 372 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Peak1Q69Z38 1735 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Chrna9G3X8Z7 479 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Foxn3Q499D0 457 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Calr3Q9D9Q6 380 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Pet2A2AHY8 747 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms