RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Ppp2r5dQ91V89 594 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 March8Q9DBD2 286 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Mboat4P0C7A3 435 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Pla2g4aP47713 748 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Nol4P60954 483 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ezh2Q61188 746 aaKnown RBP12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Exoc8Q6PGF7 716 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Pcdh11xF6ZNL5 1338 aa12.83□□□□□ -0.36
Vps54-202ENSMUST00000109578 Nme9A0A1L1SUL6 329 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ube3aO08759 870 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ccdc51Q3URS9 406 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Nsrp1Q5NCR9 542 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Asic3Q6X1Y6 530 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Rbm5Q91YE7 815 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tor1aip1Q921T2 595 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Hsd3b7Q9EQC1 369 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Mrvi1Q9WUX5 899 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 A430078G23RikE9Q7Y4 484 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Esyt2Q3TZZ7 845 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 AdpgkQ8VDL4 496 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Slc44a4Q91VA1 707 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Dnajc17Q91WT4 303 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Pkd2l2Q9JLG4 621 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 ThegQ9JMB1 375 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Sf3b2Q3UJB0 878 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Prpf38aQ4FK66 312 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Rab11fip4Q8BQP8 635 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Arhgef19Q8BWA8 802 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 GlyctkQ8QZY2 523 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 HibadhQ99L13 335 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 RabggtaQ9JHK4 567 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Dnajc21E9Q8D0 531 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tlr8P58682 1032 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Pafah1b1P63005 410 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 VrtnQ3SYK4 740 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Lrrc55Q3UY51 311 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Fkbp3Q62446 224 aaKnown RBP12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Papd7Q6PB75 542 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Lrrc41Q8K1C9 807 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 EpgnQ924X1 152 aa12.82□□□□□ -0.36
Vps54-202ENSMUST00000109578 Gm45208A0A140LJ36 292 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 NpcdF8VQB8 469 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 PurbO35295 324 aaKnown RBP12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Eif6O55135 245 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Bbs9Q811G0 885 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Plcb1Q9Z1B3 1216 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Chrna9G3X8Z7 479 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Snx12O70493 165 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Rnf40Q3U319 1001 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Krit1Q6S5J6 736 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Mindy1Q76LS9 468 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Usp27Q8CEG8 438 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Stap2Q8R0L1 411 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Vmn1r218Q8R261 298 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Vmn2r71L7N2D8 855 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 GnaqP21279 359 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ranbp1P34022 203 aaKnown RBP12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Eya3P97480 510 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Mxd3Q80US8 206 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Arl6ip4Q9JM93 229 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Plekhg2Q6KAU7 1340 aa12.81□□□□□ -0.36
Vps54-202ENSMUST00000109578 Nf2P46662 596 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tnni3kQ5GIG6 834 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Cracr2bQ80ZJ8 394 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tmem179Q8BHH9 233 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 HmcesQ8R1M0 353 aaKnown RBP12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Qtrt2B8ZXI1 415 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 NeblQ0II04 452 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Lrrc43Q3V0L5 667 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 PRAG1Q571I4 1179 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Fsip1Q9D3V5 435 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ipo7Q9EPL8 1038 aaKnown RBP12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Jag1Q9QXX0 1218 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Dock5B2RY04 1868 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Myh8P13542 1937 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Arid4aF8VPQ2 1261 aaKnown RBP12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 AgtP11859 477 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Vcpip1Q8CDG3 1220 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 OplahQ8K010 1288 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Cdk8Q8R3L8 464 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Klra17Q9JMA4 273 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Plch1Q4KWH5 1682 aa12.8□□□□□ -0.36
Vps54-202ENSMUST00000109578 Gm1993A6X8I0 212 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 SlxD3Z347 212 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Trap1aP19473 224 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Shc3Q61120 474 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Arid3aQ62431 601 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Onecut3Q8K557 490 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Eif3cQ8R1B4 911 aaKnown RBP12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Hs2st1Q8R3H7 356 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Eps8l2Q99K30 729 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Alpk1Q9CXB8 1231 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Fut8Q9WTS2 575 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Frmpd4A2AFR3 1320 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Tal1P22091 329 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Dpf1Q9QX66 387 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 JcadQ5DTX6 1320 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Atp8b1Q148W0 1251 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 Ccdc42Q5SV66 316 aa12.79□□□□□ -0.36
Vps54-202ENSMUST00000109578 RragaQ80X95 313 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms