RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Olfm3P63056 478 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 Traf5P70191 558 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 Adora1Q60612 326 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 Pram1Q6BCL1 675 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 Bend3Q6PAL0 825 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 NapaQ9DB05 295 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 GgcxQ9QYC7 757 aa11.19□□□□□ -0.62
Lig4-201ENSMUST00000095476 Npc1l1Q6T3U4 1333 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Nub1P54729 614 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Gimap7Q8R379 293 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Tmem143Q8VD26 458 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Glrx3Q9CQM9 337 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 ArpinQ9D0A3 226 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Plxnc1Q9QZC2 1574 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Ces1aE9PYP1 563 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Nfil3O08750 462 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Trim17Q7TPM3 477 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Bpifb6Q8BU51 449 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Usp27Q8CEG8 438 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Rapgef3Q8VCC8 918 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Pramef12Q9D2F1 463 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Tex9Q9D845 387 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Gtf3c6Q9D8P7 227 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 EsrrgP62509 458 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Lrrc36Q3V0M2 755 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Arhgap30Q640N3 1101 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Fam53cQ8BXQ8 393 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 H6pdQ8CFX1 789 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Med14A2ABV5 1459 aaKnown RBP11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Fbln2P37889 1221 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 FerP70451 823 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Trim21Q62191 470 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Aggf1Q7TN31 711 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 4930504O13RikQ8C5Z9 145 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Ints9Q8K114 658 aaKnown RBP11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Riok3Q9DBU3 519 aaKnown RBP11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 NpatQ8BMA5 1420 aa11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Usp42B2RQC2 1324 aaKnown RBP11.18□□□□□ -0.62
Lig4-201ENSMUST00000095476 Taf4E9QAP7 1042 aaKnown RBP11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Snap23O09044 210 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Sept2P42208 361 aaKnown RBP11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Wdr70Q3TWF6 657 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Skap2Q3UND0 358 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Ankrd6Q69ZU8 712 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Exoc3Q6KAR6 755 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Cacna2d2Q6PHS9 1154 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Tsen34Q8BMZ5 316 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Aldh5a1Q8BWF0 523 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 PawrQ925B0 333 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 4931423N10RikQ9D4J9 382 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Rwdd2aQ9D9S3 292 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Stx12Q9ER00 274 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Gpt2Q8BGT5 522 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Trim42Q9D2H5 723 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Tgfb1i1Q62219 461 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Ufl1Q8CCJ3 793 aaKnown RBP11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Scyl2Q8CFE4 930 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 MlxiplQ99MZ3 864 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Klhl14Q69ZK5 630 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Slf2Q6P9P0 1278 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Ppfia2Q8BSS9 1257 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Adamts12Q811B3 1600 aa11.17□□□□□ -0.62
Lig4-201ENSMUST00000095476 Nr1i2O54915 431 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Ap1m1P35585 423 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Q6PD19 689 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Setd6Q9CWY3 473 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Tmem191cQ9JJB1 302 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Kdm5aQ3UXZ9 1690 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 CflarO35732 481 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 GclcP97494 637 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Nlrp9aQ66X03 949 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 TwistnbQ78WZ7 330 aaKnown RBP11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Slf1Q8R3P9 1054 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Plcb4Q91UZ1 1175 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Wars2Q9CYK1 360 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Fmnl1Q9JL26 1094 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Slc12a7Q9WVL3 1083 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Q3TYL0 343 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Slc38a10Q5I012 1090 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 CoilQ5SU73 570 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Cnnm4Q69ZF7 771 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Tc2nQ91XT6 489 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Dhx58Q99J87 678 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Rnf4Q9QZS2 194 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Mast1Q9R1L5 1570 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Gbp10Q000W5 611 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 PcQ05920 1178 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Exoc5Q3TPX4 708 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Cyfip2Q5SQX6 1253 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Rab34Q64008 259 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Lrrc1Q80VQ1 524 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Jmjd4Q8BFT6 427 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Spdl1Q923A2 608 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Trim7Q923T7 510 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Add2Q9QYB8 725 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Abcc4E9Q236 1325 aa11.16□□□□□ -0.62
Lig4-201ENSMUST00000095476 Gm30191A0A0U1RNT7 187 aa11.15□□□□□ -0.62
Lig4-201ENSMUST00000095476 1700122O11RikJ3QPW6 241 aa11.15□□□□□ -0.62
Lig4-201ENSMUST00000095476 Eif4a1P60843 406 aaKnown RBP11.15□□□□□ -0.62
Lig4-201ENSMUST00000095476 Snip1Q8BIZ6 383 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms