RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Nlgn1Q99K10 843 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Ccdc182Q9D9C6 152 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Prrc2bQ7TPM1 1486 aaKnown RBP15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Dync1i2O88487 612 aaKnown RBP15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Krt87Q6IMF0 495 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Zc3h6Q8BYK8 1177 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Ncoa5Q91W39 579 aaKnown RBP15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Pcif1P59114 706 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Ppp4r1Q8K2V1 951 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Stn1Q8K2X3 378 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Pex19Q8VCI5 299 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Spats2lQ91WJ7 558 aaKnown RBP15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Sgk1Q9WVC6 431 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Gm3415J3QMS8 315 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Zscan2Q07230 614 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Gm4981Q3ULJ8 291 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Msl1Q6PDM1 616 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Cyp26b1Q811W2 512 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Ushbp1Q8R370 680 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Gm3404Q9D506 307 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Diaph3Q9Z207 1171 aa15.22■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Idh1O88844 414 aaKnown RBP15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Pde6aP27664 859 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Ppp2r5aQ6PD03 486 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 AdarQ99MU3 1178 aaKnown RBP15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 MybP06876 636 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Gpc4P51655 557 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Cdc37Q61081 379 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Map3k7Q62073 579 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Panx2Q6IMP4 677 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Rnf168Q80XJ2 565 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Q8R1Y2 203 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Dctpp1Q9QY93 170 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Rsbn1lD3Z0K6 821 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Gngt2Q61017 69 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 SrlQ7TQ48 910 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Ankrd45Q810N6 248 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Rnf14Q9JI90 485 aa15.21■□□□□ 0.03
Col3a1-201ENSMUST00000087883 Syde2E9PUP1 1314 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ttc41Q692V3 1318 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Clcn6O35454 870 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Rasgrf1P27671 1262 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cd22P35329 862 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 TxkP42682 527 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tcp11Q01755 566 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gm14685Q52KH6 695 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cage1Q5IR70 849 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Cep70Q6IQY5 616 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 AsphQ8BSY0 741 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Hps4Q99KG7 671 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Sdr42e1Q9D665 394 aa15.21■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gm43638A0A0J9YU36 694 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Rab20P35295 233 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ppp1r13bQ62415 1087 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Erp44Q9D1Q6 406 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 GfapP03995 430 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Chl1P70232 1209 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Trim71Q1PSW8 855 aaKnown RBP15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Palb2Q3U0P1 1104 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 OcrlQ6NVF0 900 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Anapc5Q8BTZ4 740 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Ccdc92Q8VDN4 314 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Creb3l3Q91XE9 479 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Surf1P09925 306 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Slc35f6Q8VE96 372 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tor1aip1Q921T2 595 aaKnown RBP15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Krt27Q9Z320 448 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Arhgef40Q3UPH7 1517 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Slc3a2P10852 526 aaKnown RBP15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Calb1P12658 261 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Oxsr1Q6P9R2 527 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Spata17Q9D552 379 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 3830403N18RikQ9D6C3 208 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Lmtk2Q3TYD6 1471 aa15.2■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Lipo1J3QME6 396 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Elf1Q60775 612 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Slc18a1Q8R090 521 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Nfe2l3Q9WTM4 660 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 HpdP49429 393 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Slc12a7Q9WVL3 1083 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Gm28042B7ZCM9 1014 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Dnajc8Q6NZB0 253 aaKnown RBP15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Slc17a8Q8BFU8 601 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Phf20l1Q8CCJ9 1013 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Appl2Q8K3G9 662 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Xpo5Q924C1 1204 aaKnown RBP15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Rwdd2aQ9D9S3 292 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Disp3A3KFU9 1347 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Npc1l1Q6T3U4 1333 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 ItkQ03526 625 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Spata18Q0P557 537 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Rcor2Q8C796 523 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Catsper1Q91ZR5 686 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Trim66Q924W6 1242 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Bnip3lQ9Z2F7 218 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Tnip3A0A1D5RMN0 279 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Stox1B2RQL2 990 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 EsrrgP62509 458 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Zbtb38Q3LR78 1197 aa15.19■□□□□ 0.02
Col3a1-201ENSMUST00000087883 Nlrp4fQ66X05 959 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 44.2 ms