RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 3830403N18RikQ9D6C3 208 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Cfap45Q9D9U9 551 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sil1Q9EPK6 465 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Aox3G3X982 1335 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Arhgap23Q69ZH9 1483 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Pdha1P35486 390 aaKnown RBP10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tmod1P49813 359 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Chp1P61022 195 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Capza3P70190 299 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Atp8a2P98200 1148 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Olfr121Q5CZY0 321 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Secisbp2lQ6A098 1086 aaKnown RBP10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sval3Q76I99 144 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Chmp2bQ8BJF9 213 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Dnajc3Q91YW3 504 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Mfap3Q922T2 349 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sirt1Q923E4 737 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 2310002L09RikQ9D7L5 217 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Adrm1Q9JKV1 407 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Disp3A3KFU9 1347 aa10.72□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ddx60E9PZQ1 1711 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gml2G5E8L7 176 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Oprl1P35377 367 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Cct6aP80317 531 aaKnown RBP10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rgs9bpQ148R9 237 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Rasip1Q3U0S6 961 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Wasf2Q8BH43 497 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Skor1Q8BX46 964 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Igf2bp3Q9CPN8 579 aaKnown RBP10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Klhl35Q9CZ49 574 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm28919A0A087WP35 240 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Gm1758F6VZZ1 202 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Tcp1P11983 556 aaKnown RBP10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ttc22Q8C159 568 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 NemfQ8CCP0 1064 aaKnown RBP10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Inpp5fQ8CDA1 1132 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Spata2Q8K004 515 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Ccdc43Q9CR29 222 aaKnown RBP10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Zbtb43Q9DAI4 467 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Dclre1aQ9JIC3 1026 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Sh2b2Q9JID9 621 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Noa1Q9JJG9 693 aaKnown RBP10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Trp53inp1Q9QXE4 239 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Fam50bQ9WTJ8 334 aa10.71□□□□□ -0.69
Hmgb1-201ENSMUST00000085546 Lama4P97927 1816 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Wdr72D3YYM4 1114 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Sclt1G5E861 688 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 MttpO08601 894 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 MaeaQ4VC33 396 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 CcnhQ61458 323 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rimbp2Q80U40 1072 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rasal3Q8C2K5 1041 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Q8C5K5 320 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Mical1Q8VDP3 1048 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Stk31Q99MW1 1018 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Bag3Q9JLV1 577 aaKnown RBP10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Dnajc7Q9QYI3 494 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 JcadQ5DTX6 1320 aa10.71□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Neo1P97798 1493 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Palm3A2TJV2 734 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Fam71e2L7N480 754 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Cbx3P23198 183 aaKnown RBP10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ighmbp2P40694 993 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccng1P51945 294 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 RelaQ04207 549 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Pyroxd1Q3TMV7 498 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Fam8a1Q3URQ4 399 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Slc4a10Q5DTL9 1118 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Satb1Q60611 764 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 SkiQ60698 725 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Rbm12b2Q66JV4 834 aaKnown RBP10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ccdc150Q8CDI7 1110 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Fam193aQ8CGI1 1231 aaKnown RBP10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gstm4Q8R5I6 218 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Xpo6Q924Z6 1125 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Speer4bQ9D9F7 267 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gabbr1Q9WV18 960 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Speer3W4VSP1 261 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm5580A0A0N4SVP8 411 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm3264L7N2C5 238 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Akap1O08715 857 aaKnown RBP10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Flot1O08917 428 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Abcd1P48410 736 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Exosc10P56960 887 aaKnown RBP10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Lrch1P62046 709 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gm21985Q6P6P5 1106 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Map10Q8BJS7 891 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Usp44Q8C2S0 711 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gbp2Q9Z0E6 589 aa10.7□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Myh7Q91Z83 1935 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Adgrf5G5E8Q8 1348 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 GnazO70443 355 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 SagP20443 403 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Inf2Q0GNC1 1273 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Gpsm3Q3U1Z5 159 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Jade2Q6ZQF7 829 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Klhl29Q80T74 875 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 Ripor2Q80U16 1078 aa10.69□□□□□ -0.7
Hmgb1-201ENSMUST00000085546 U2af1l4Q8BGJ9 220 aa10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms