RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Appl2Q8K3G9 662 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Atp6v1e2Q9D593 226 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Spata18Q0P557 537 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 HdlbpQ8VDJ3 1268 aaKnown RBP10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Emilin1Q99K41 1017 aa10.23□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Serpini1O35684 410 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Idh1O88844 414 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ftl1P29391 183 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 G3bp2P97379 482 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mettl14Q3UIK4 456 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 IarsQ8BU30 1262 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cabs1Q8C633 391 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Slc18a1Q8R090 521 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Prpf38aQ4FK66 312 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 AdarQ99MU3 1178 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 KynuQ9CXF0 464 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Erp44Q9D1Q6 406 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Sdr42e1Q9D665 394 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rwdd2aQ9D9S3 292 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 IdeQ9JHR7 1019 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Adcy9P51830 1353 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Tuft1O08970 390 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Prkg1P0C605 671 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ehd2Q8BH64 543 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Sept11Q8C1B7 431 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Magi2Q9WVQ1 1275 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Lcmt1A0A0U1RNF2 332 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Arhgap42B2RQE8 841 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Atf5O70191 283 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 SpertQ32MG2 446 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Atp2b4Q6Q477 1205 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 StrbpQ91WM1 672 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Cdc26Q99JP4 85 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pus3Q9JI38 481 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Dach1Q9QYB2 751 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Ttc41Q692V3 1318 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Casp2P29594 452 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Nr2f2P43135 414 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Irf5P56477 497 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rps8P62242 208 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Prr18Q6PAN7 307 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 GancQ8BVW0 898 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rcor2Q8C796 523 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Mylk2Q8VCR8 613 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 CactinQ9CS00 772 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Magi3Q9EQJ9 1476 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Sox5P35710 763 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 MarsQ68FL6 902 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Usp33Q8R5K2 909 aa10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gtf2iQ9ESZ8 998 aaKnown RBP10.22□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pagr1bF6V0H0 108 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 1700122O11RikJ3QPW6 241 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Hspa2P17156 633 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Myo1fP70248 1099 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Enox1Q8BHR2 643 aaKnown RBP10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 MgarpQ8VI64 283 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Pagr1aQ99L02 253 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 FliiQ9JJ28 1271 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 TxkP42682 527 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 DeptorQ570Y9 409 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Fxr1Q61584 677 aaKnown RBP10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Sval3Q76I99 144 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 E330017A01RikQ8BU47 192 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 PigbQ9JJQ0 542 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Vstm4T1NXB5 319 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Arhgef11Q68FM7 1552 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Rabgap1A2AWA9 1064 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Zfp408H7BX78 710 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 RpsaP14206 295 aaKnown RBP10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Stx2Q00262 289 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Csgalnact2Q8C1F4 542 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Eif4a3Q91VC3 411 aaKnown RBP10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Gpaa1Q9WTK3 621 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Snx1Q9WV80 522 aa10.21□□□□□ -0.77
Prpf40a-201ENSMUST00000076313 Vmn2r68L7N2B3 851 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Eef2kO08796 724 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Zscan2Q07230 614 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ankrd6Q69ZU8 712 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Slc44a1Q6X893 653 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Ccdc68Q8BVC4 333 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cbwd1Q8VEH6 393 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 GdaQ9R111 454 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Calb1P12658 261 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tcp11l2Q8K1H7 517 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cacnb1Q8R3Z5 597 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Prc1Q99K43 603 aaKnown RBP10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Hfm1D3Z4R1 1434 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Gpr182P43142 395 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Sparcl1P70663 650 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Bsdc1Q80Y55 427 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Zfp317Q8C0Q5 607 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Tsc1Q9EP53 1161 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Sgk1Q9WVC6 431 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Stk39Q9Z1W9 556 aa10.21□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Arhgef10lA2AWP8 1280 aa10.2□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Pde8bE9Q4S1 865 aa10.2□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Cdc37Q61081 379 aa10.2□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Anks1bQ8BIZ1 1259 aa10.2□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Slc35g1Q8BY79 368 aa10.2□□□□□ -0.78
Prpf40a-201ENSMUST00000076313 Kat14Q8CID0 779 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms