RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Ccdc14Q8K2J4 934 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Kcnq3Q8K3F6 873 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Klhl20Q8VCK5 604 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Tspyl4Q8VD63 406 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Prpf3Q922U1 683 aaKnown RBP10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Copb1Q9JIF7 953 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Ccdc186Q8C9S4 917 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Pym1Q8CHP5 203 aaKnown RBP10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 C8aQ8K182 587 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Ccdc97Q9DBT3 340 aa10.96□□□□□ -0.65
Cpsf1-201ENSMUST00000071898 Cetn3O35648 167 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Nr1i2O54915 431 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Tagap1P0CAX8 505 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Tnnc1P19123 161 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Senp1P59110 640 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Fgfr1opQ66JX5 399 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Pcdhb14Q6PB90 796 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 ErfeQ6PGN1 340 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Galnt17Q7TT15 598 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Hook3Q8BUK6 718 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Cdk8Q8R3L8 464 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 PdclQ9DBX2 301 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Kansl3A2RSY1 903 aaKnown RBP10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Cyp3a25O09158 503 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Ccdc157Q5SPX1 718 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Gbp4Q61107 620 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Kif5bQ61768 963 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Fkbp3Q62446 224 aaKnown RBP10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Fam102bQ8BQS4 339 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Alx1Q8C8B0 326 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Ttll1Q91V51 423 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Prg3Q9JL95 222 aa10.96□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Fam196bQ6GQV1 535 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Kcnf1Q7TSH7 493 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Anks1bQ8BIZ1 1259 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Calcoco1Q8CGU1 691 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Glis2Q8VDL9 521 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Adcy3Q8VHH7 1145 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Magi2Q9WVQ1 1275 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Krt24A1L317 512 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 E9QMW4 1145 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Psmc2P46471 433 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Gja3Q64448 417 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Dhx40Q6PE54 779 aaKnown RBP10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Sval3Q76I99 144 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Kif2bQ8C0N1 668 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Slc44a4Q91VA1 707 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Rgs9O54828 675 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Usp53P15975 1069 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 RubcnlQ3TD16 648 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 MmeQ61391 750 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Ces5aQ6AW46 575 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Slc9c1Q6UJY2 1175 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 RragaQ80X95 313 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Nek9Q8K1R7 984 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Vps36Q91XD6 386 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Sar1bQ9CQC9 198 aa10.95□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Gm3893E9Q1I1 302 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 EgfrQ01279 1210 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Gm5935Q497S0 212 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 LrmpQ60664 539 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Cyp7b1Q60991 507 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Glra4Q61603 456 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Exoc3Q6KAR6 755 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 PicalmQ7M6Y3 660 aaKnown RBP10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Smc1aQ9CU62 1233 aaKnown RBP10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Acot3Q9QYR7 432 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Nlrp5Q9R1M5 1163 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 B3galt4Q9Z0F0 371 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Nav1Q8CH77 1875 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Dnajc21E9Q8D0 531 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Adam7O35227 789 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Dnm2P39054 870 aaKnown RBP10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Best3Q6H1V1 669 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Fmnl3Q6ZPF4 1028 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Bbs9Q811G0 885 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Ccdc38Q8CDN8 563 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Vps37cQ8R105 352 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Arl8aQ8VEH3 186 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Prkag2Q91WG5 566 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Fam122aQ9DB52 284 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Akap11E9Q777 1895 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Acot10Q32MW3 439 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Clul1Q3ZRW6 464 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Swap70Q6A028 585 aaKnown RBP10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Gpcpd1Q8C0L9 675 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Tfap4Q9JIZ5 338 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Dcdc2bF7BCK0 340 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Casp12O08736 419 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Tdo2P48776 406 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Stxbp2Q64324 593 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Zfp341Q6PGC9 846 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Armcx3Q8BHS6 379 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Iffo1Q8BXL9 562 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Plcg2Q8CIH5 1265 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 BaatQ91X34 420 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Stx17Q9D0I4 301 aa10.94□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Rgs12Q8CGE9 1381 aa10.93□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Gm28510A0A087WP28 240 aa10.93□□□□□ -0.66
Cpsf1-201ENSMUST00000071898 Phldb3E9QAF4 648 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms