RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 March8Q9DBD2 286 aa14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Rpf2Q9JJ80 306 aaKnown RBP14.97□□□□□ -0.01
Nup88-201ENSMUST00000035283 Pcdh11xF6ZNL5 1338 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Aox3G3X982 1335 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Surf6P70279 355 aaKnown RBP14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Cep70Q6IQY5 616 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Def6Q8C2K1 630 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trim9Q8C7M3 817 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Erlin1Q91X78 346 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ccdc43Q9CR29 222 aaKnown RBP14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Tmem192Q9CXT7 266 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Fam173bQ9D1Z3 247 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 CenphQ9QYM8 241 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trip6Q9Z1Y4 480 aa14.96□□□□□ -0.01
Nup88-201ENSMUST00000035283 Odf2A3KGV1 830 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Nfil3O08750 462 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Rhbdl3P58873 404 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tmtc1Q3UV71 942 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Lrrc55Q3UY51 311 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Asic1Q6NXK8 526 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mtss1lQ6P9S0 715 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tekt3Q6X6Z7 490 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 F13a1Q8BH61 732 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Dclk3Q8BWQ5 790 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 AopepQ8BXQ6 817 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 LgsnQ8CIX8 563 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Rapgef3Q8VCC8 918 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ubxn6Q99PL6 442 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Lgr5Q9Z1P4 907 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 PappaQ8R4K8 1624 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ccdc88aQ5SNZ0 1873 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tex13cD3YU32 604 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Trim55G3X8Y1 545 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Sec24cG3X972 1096 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Aco1P28271 889 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ssrp1Q08943 708 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mettl25Q6NXH8 597 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Fam193aQ8CGI1 1231 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mmgt1Q8K273 131 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Eif4a3Q91VC3 411 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tor1aip1Q921T2 595 aaKnown RBP14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Adgra3Q7TT36 1310 aa14.95□□□□□ -0.02
Nup88-201ENSMUST00000035283 Kcnh4A2A5F7 1018 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mcm7Q61881 719 aaKnown RBP14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ccdc181Q80ZU5 509 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Fam177a1Q8BR63 207 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Fbxo18Q8K2I9 1042 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Dynll2Q9D0M5 89 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 AllcQ9JHX6 414 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Irx5Q9JKQ4 484 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Psma7Q9Z2U0 248 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Pnpla6Q3TRM4 1355 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mx1P09922 631 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Nol4P60954 483 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Morc2bQ8C5W4 1022 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Cabp7Q91ZM8 215 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Plagl2Q925T4 496 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 NsmfQ99NF2 532 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 NgdnQ9DB96 315 aaKnown RBP14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mapk8ip1Q9WVI9 707 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Peak1Q69Z38 1735 aa14.94□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ube4aE9Q735 1028 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 LrmpQ60664 539 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Shc3Q61120 474 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 NntQ61941 1086 aaKnown RBP14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Maip1Q8BHE8 291 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Parp10Q8CIE4 960 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Znrd1-asQ8R0E5 213 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 KynuQ9CXF0 464 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Snrnp35Q9D384 244 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Gm45208A0A140LJ36 292 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Gm1993A6X8I0 212 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 SlxD3Z347 212 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tcp10bE9PYJ0 438 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Man1a2P39098 641 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ccna1Q61456 421 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Sh3gl2Q62420 352 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 RragaQ80X95 313 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 DlatQ8BMF4 642 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ndufv1Q91YT0 464 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 MycbpQ9EQS3 103 aa14.93□□□□□ -0.02
Nup88-201ENSMUST00000035283 MybP06876 636 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Fxr1Q61584 677 aaKnown RBP14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Fkbp3Q62446 224 aaKnown RBP14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Syce1Q9D495 329 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Letm1Q9Z2I0 738 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Golgb1E9PVZ8 3238 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Scn11aQ9R053 1765 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Apol6B7ZC55 329 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Akr1b10G5E895 316 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Pip4k2aO70172 405 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Rnaseh1O70338 285 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Celf1P28659 486 aaKnown RBP14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Actn4P57780 912 aaKnown RBP14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tbc1d2bQ3U0J8 965 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Hirip3Q8BLH7 601 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Cdk17Q8K0D0 523 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ubxn1Q922Y1 297 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ttc14Q9CSP9 761 aa14.92□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mad2l2Q9D752 211 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms