RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Ap5z1Q3U829 807 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Trim80Q3V061 624 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Acbd5Q5XG73 508 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Acot11Q8VHQ9 594 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tfap4Q9JIZ5 338 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Arhgap23Q69ZH9 1483 aa20.24■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Col15a1O35206 1367 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Setbp1Q9Z180 1582 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ccdc78D3Z5T1 437 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rgs22G3UYX5 1258 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ap1g2O88512 791 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Dynll1P63168 89 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ripply1Q2WG77 201 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Gm5168Q4KL04 211 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cxcl11Q9JHH5 100 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Esr2O08537 530 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ift81O35594 676 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Hdac4Q6NZM9 1076 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Bzw2Q91VK1 419 aaKnown RBP20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Large1Q9Z1M7 756 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tom1O88746 492 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Nr2f2P43135 414 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rcn2Q8BP92 320 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Csgalnact2Q8C1F4 542 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Erp44Q9D1Q6 406 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 3830403N18RikQ9D6C3 208 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Unc13aQ4KUS2 1712 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Acad12D3Z7X0 555 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ugt1a6bK9J7B2 531 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Vmn2r68L7N2B3 851 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cyp3a25O09158 503 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Gfpt1P47856 697 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 IvlP48997 467 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Large2Q5XPT3 690 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cyp7b1Q60991 507 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ugt1a6Q64435 531 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ugt1a7cQ6ZQM8 531 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Haus4Q8BFT2 363 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Pus7lQ8CE46 702 aa20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Prpf3Q922U1 683 aaKnown RBP20.23■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Nova2D3YVV7 556 aaKnown RBP20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Traf5P70191 558 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Tom1l1Q923U0 474 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Nxf1Q99JX7 618 aaKnown RBP20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rsbn1lD3Z0K6 821 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Heatr4E9Q357 955 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Copb2O55029 905 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Stim2P83093 746 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Riox2Q8CD15 465 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 GlyctkQ8QZY2 523 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rrp1bQ91YK2 724 aaKnown RBP20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Ndst4Q9EQW8 872 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 ArsiQ32KI9 573 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Fam161bQ8CB59 589 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Slc35f6Q8VE96 372 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 MbipQ99LQ1 341 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Grin2dQ03391 1323 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Phldb3E9QAF4 648 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Eef1bO70251 225 aaKnown RBP20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Pla2g4bP0C871 782 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Fxr1Q61584 677 aaKnown RBP20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Rassf6Q80UQ2 353 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Stac3Q8BZ71 360 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Lonp1Q8CGK3 949 aaKnown RBP20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 MlxiplQ99MZ3 864 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Dbndd2Q9CRD4 158 aa20.22■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Fam83bQ0VBM2 1012 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Gucy2fQ5SDA5 1108 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 HarsQ61035 509 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Haus7Q8BKT8 364 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Serpinb13Q8CDC0 389 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Thap2Q9D305 217 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Stag1Q9D3E6 1258 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Abcc3B2RX12 1523 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Gas7Q60780 421 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 B4galnt4Q766D5 1034 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Gad1P48318 593 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Cap2Q9CYT6 476 aa20.21■□□□□ 0.83
Ebf3-201ENSMUST00000033378 Krt24A1L317 512 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Gm5936A2BG95 728 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Gm5640A3KG49 728 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Trim52Q8CDV4 233 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 GsdmeQ9Z2D3 512 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Xrcc5P27641 732 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Nlrx1Q3TL44 975 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Q3TTJ4 293 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Mier3Q3UHF3 551 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ano8Q6PB70 1060 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 CtifQ6PEE2 600 aaKnown RBP20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Cacnb1Q8R3Z5 597 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Usp15Q8R5H1 981 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Rusc2Q80U22 1514 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Lrriq3Q14DL3 633 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Kiaa1211Q5PR69 1207 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Sec63Q8VHE0 760 aaKnown RBP20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Rims1Q99NE5 1463 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Pbrm1Q8BSQ9 1634 aaKnown RBP20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ube4aE9Q735 1028 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Pgrmc1O55022 195 aa20.2■□□□□ 0.82
Ebf3-201ENSMUST00000033378 Ccdc125Q5U465 500 aa20.2■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms