RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Hnrnph2P70333 449 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Yy1Q00899 414 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rbm26Q6NZN0 1012 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 NemfQ8CCP0 1064 aaKnown RBP11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Pdzd9Q9D9M4 266 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Ccdc89Q9DA73 370 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Plekho1Q9JIY0 408 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Rabgef1Q9JM13 491 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Stk39Q9Z1W9 556 aa11.77□□□□□ -0.52
Rnf40-201ENSMUST00000033088 Atp2c2A7L9Z8 944 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Mms22lB1AUR6 1238 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Exoc5Q3TPX4 708 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Usp13Q5BKP2 858 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Clec16aQ80U30 1036 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Copb2O55029 905 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Kif5aP33175 1027 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tmed1Q3V009 227 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 HarsQ61035 509 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Lrrcc1Q69ZB0 1026 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 KaznQ69ZS8 779 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cyp4x1Q6A152 507 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Naif1Q6PFD7 327 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Sval3Q76I99 144 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Slc20a2Q80UP8 656 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Bola2Q8BGS2 86 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ces1dQ8VCT4 565 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ccne2Q9Z238 404 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Msh6P54276 1358 aaKnown RBP11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Abca15E9PWH4 1668 aa11.77□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Map7d1A2AJI0 846 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Hmgb1P63158 215 aaKnown RBP11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Fam83bQ0VBM2 1012 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Rnf207Q3V3A7 635 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ctnna2Q61301 953 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Usp50Q6P8X6 390 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ttc26Q8BS45 554 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Stn1Q8K2X3 378 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Etnk1Q9D4V0 363 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 MefvQ9JJ26 767 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Pcdhb9E9Q5G2 828 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tmem165P52875 323 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gjb4Q02738 266 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cnnm2Q3TWN3 875 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Zbtb16Q3UQ17 673 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Serpinb6dQ3UWK8 375 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 RgmbQ7TQ33 436 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Scyl2Q8CFE4 930 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Spats2Q8K1N4 545 aaKnown RBP11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Haus2Q9CQS9 234 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 ErmapQ9JLN5 566 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cdhr2E9Q7P9 1308 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tal1P22091 329 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ccdc92bQ5SUE3 299 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Zbtb17Q60821 794 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cep104Q80V31 926 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Vps37dQ810I0 261 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Usp44Q8C2S0 711 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Kif17Q99PW8 1038 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Coro7Q9D2V7 922 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Znf394Q9Z1D9 521 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Psma7Q9Z2U0 248 aa11.76□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Slit1Q80TR4 1531 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 P4hbP09103 509 aaKnown RBP11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Lig1P37913 916 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 StilQ60988 1262 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Klhl29Q80T74 875 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Morc4Q8BMD7 928 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Phc3Q8CHP6 981 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Dr1Q91WV0 176 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Atg3Q9CPX6 314 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Psma8Q9CWH6 250 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Stag1Q9D3E6 1258 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ccdc182Q9D9C6 152 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 NapaQ9DB05 295 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Peg12Q9WVA7 283 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Clip2Q9Z0H8 1047 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 1700016G14RikA0A286YCZ6 238 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tpp1O89023 562 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Zfp42P22227 288 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gsta4P24472 222 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Dnm2P39054 870 aaKnown RBP11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 LtbrP50284 415 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 PltpP55065 493 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 MagohP61327 146 aaKnown RBP11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Phf8Q80TJ7 1023 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 MagohbQ9CQL1 146 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Uts2Q9QZQ3 123 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Irs4Q9Z0Y7 1216 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Nmt2O70311 529 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Wee1P47810 646 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gad1P48318 593 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ripply1Q2WG77 201 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Prl2c1Q5SVL9 228 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Fbxo18Q8K2I9 1042 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 SfpqQ8VIJ6 699 aaKnown RBP11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cabp7Q91ZM8 215 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tom1l1Q923U0 474 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Pramef12Q9D2F1 463 aa11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Nop56Q9D6Z1 580 aaKnown RBP11.75□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Slc39a2G3X943 309 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms