RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Akr1c19G3X9Y6 323 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 AgtP11859 477 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Psmb7P70195 277 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Fhdc1Q3ULZ2 1149 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Lrrc55Q3UY51 311 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Scnn1aQ61180 699 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ccdc14Q8K2J4 934 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Pcdhb5Q91XZ5 792 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dhx30Q99PU8 1217 aaKnown RBP14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 RabggtaQ9JHK4 567 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 AW822073A0A0N4SUK1 652 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Lrrfip1Q3UZ39 729 aaKnown RBP14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Slc9a2Q3ZAS0 814 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 GnptabQ69ZN6 1235 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Zbtb39Q6PDK0 712 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dpp8Q80YA7 892 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Cdc23Q8BGZ4 597 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Arhgef19Q8BWA8 802 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Hgh1Q8C3I8 393 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Spice1Q8C804 860 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Exoc1Q8R3S6 894 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 CutaQ9CQ89 177 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Nlrp5Q9R1M5 1163 aa14.24□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Zfp646Q6NV66 1788 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Golgb1E9PVZ8 3238 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Cep95Q8BVV7 827 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 MtrrQ8C1A3 696 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rassf4Q8CB96 322 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Spata4Q8K3V1 295 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Krt82Q99M74 516 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Cd274Q9EP73 290 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Scgb2b11A0A087WR49 112 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Gm10378F6XQQ1 160 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Chrna9G3X8Z7 479 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dok7Q18PE0 504 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ttll1Q91V51 423 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tmem39aQ9CYC3 486 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Klhl10Q9D5V2 608 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 EhhadhQ9DBM2 718 aa14.23□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Etnk2A7MCT6 385 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Samd1D3YXK1 519 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ces1aE9PYP1 563 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Nkx2-5P42582 318 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Mcm6P97311 821 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tpm4Q6IRU2 248 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Asic1Q6NXK8 526 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tubb2aQ7TMM9 445 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Camsap3Q80VC9 1252 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 D130040H23RikQ8BII3 405 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 LarsQ8BMJ2 1178 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rrp1bQ91YK2 724 aaKnown RBP14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tubb2bQ9CWF2 445 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tmem192Q9CXT7 266 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Krt34Q9D646 392 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Slc26a4Q9R155 780 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Map7d1A2AJI0 846 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 ByslO54825 436 aaKnown RBP14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Terf1P70371 421 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Acot10Q32MW3 439 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Krt87Q6IMF0 495 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Tmco3Q8BH01 678 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ttc26Q8BS45 554 aa14.22□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Dnai2A2AC93 623 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rsbn1lD3Z0K6 821 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Gcom1E9PZ54 550 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Eif6O55135 245 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ano9P86044 747 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Ssrp1Q08943 708 aaKnown RBP14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 MyzapQ3UIJ9 466 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Pnma5Q5DTT8 618 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Col5a2Q3U962 1497 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Abcd1P48410 736 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Rasa3Q60790 834 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 TxlnaQ6PAM1 554 aaKnown RBP14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Sdccag8Q80UF4 717 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Igdcc3Q8BQC3 813 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 MicalclQ9D5U9 680 aa14.21□□□□□ -0.13
Rnf4-201ENSMUST00000030992 Plxnb2B2RXS4 1842 aa14.21□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Magea10A2AMW4 325 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Kif2aP28740 705 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Sema4bQ62179 823 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Ppp1r11Q8K1L5 131 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Fsip1Q9D3V5 435 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 1700003F12RikA2AKE5 210 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Lrrc32G3XA59 663 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Kifc2O08672 792 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Serpinb6bO08804 377 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Prl2c3P04768 224 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Mdh1P14152 334 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Ttbk2Q3UVR3 1243 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Cct6bQ61390 531 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Q66JV7 365 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Pabpc4Q6PHQ9 660 aaKnown RBP14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 WhrnQ80VW5 918 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Cyp4f39Q8BGU0 532 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 WaslQ91YD9 501 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Serpinb12Q9D7P9 423 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Cmtr1Q9DBC3 837 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 March8Q9DBD2 286 aa14.2□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Pdcd6ipQ9WU78 869 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 85.3 ms