RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Ushbp1Q8R370 680 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ppp2r5dQ91V89 594 aa12.68□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gm30191A0A0U1RNT7 187 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gm45208A0A140LJ36 292 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Nme9A0A1L1SUL6 329 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Slc9a2Q3ZAS0 814 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ddx3yQ62095 658 aaKnown RBP12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Arhgef19Q8BWA8 802 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tmem132aQ922P8 1018 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Arfgef1G3X9K3 1846 aaKnown RBP12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Duox1A2AQ92 1551 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Chrna9G3X8Z7 479 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Stim1P70302 685 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ssrp1Q08943 708 aaKnown RBP12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Zfp781Q0P5U5 243 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 ThegQ9JMB1 375 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fer1l6E0CZ42 1862 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Sec31aQ3UPL0 1230 aaKnown RBP12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Prpf38aQ4FK66 312 aaKnown RBP12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ezh2Q61188 746 aaKnown RBP12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tubb2aQ7TMM9 445 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tubb2bQ9CWF2 445 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Plekhg2Q6KAU7 1340 aa12.67□□□□□ -0.38
Vps54-201ENSMUST00000006221 Map7d2A2AG50 781 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Mcm7Q61881 719 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Mindy1Q76LS9 468 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Mxd3Q80US8 206 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 GlyctkQ8QZY2 523 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 HibadhQ99L13 335 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Cd274Q9EP73 290 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Qtrt2B8ZXI1 415 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Skap2Q3UND0 358 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Papd7Q6PB75 542 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tmem179Q8BHH9 233 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Matr3Q8K310 846 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Onecut3Q8K557 490 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 HmcesQ8R1M0 353 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Vmn1r218Q8R261 298 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Pla2g4aP47713 748 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Tnni3kQ5GIG6 834 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Secisbp2lQ6A098 1086 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Stap2Q8R0L1 411 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Lztfl1Q9JHQ5 299 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Frmpd4A2AFR3 1320 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fam186bD3Z420 943 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Vmn2r71L7N2D8 855 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Gas1Q01721 343 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 VrtnQ3SYK4 740 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Sf3b2Q3UJB0 878 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ankrd13cQ3UX43 541 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Arid3aQ62431 601 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Recql4Q75NR7 1216 aaKnown RBP12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Arl6ip4Q9JM93 229 aa12.66□□□□□ -0.38
Vps54-201ENSMUST00000006221 Ube3aO08759 870 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fkbp3Q62446 224 aaKnown RBP12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Lrrc41Q8K1C9 807 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 AdpgkQ8VDL4 496 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 EpgnQ924X1 152 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Rps6ka4Q9Z2B9 773 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 GakQ99KY4 1305 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Eif6O55135 245 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Eya3P97480 510 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Lrrc43Q3V0L5 667 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Asic3Q6X1Y6 530 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Rab11fip4Q8BQP8 635 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Dnajc17Q91WT4 303 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Fsip1Q9D3V5 435 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 RabggtaQ9JHK4 567 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Marf1Q8BJ34 1730 aaKnown RBP12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Snx12O70493 165 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Bbs9Q811G0 885 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Cdk8Q8R3L8 464 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Rbm5Q91YE7 815 aaKnown RBP12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Pkd2l2Q9JLG4 621 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Plcb1Q9Z1B3 1216 aa12.65□□□□□ -0.38
Vps54-201ENSMUST00000006221 Arid4aF8VPQ2 1261 aaKnown RBP12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Nf2P46662 596 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Lilrb3P97484 841 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Cracr2bQ80ZJ8 394 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Igdcc3Q8BQC3 813 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Alpk1Q9CXB8 1231 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Klra17Q9JMA4 273 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 AgtP11859 477 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Tal1P22091 329 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Shc3Q61120 474 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Vcpip1Q8CDG3 1220 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Usp27Q8CEG8 438 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Kremen1Q99N43 473 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Dnajc21E9Q8D0 531 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 GnaqP21279 359 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Kcnj11Q61743 390 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Tbc1d23Q8K0F1 684 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 HyiQ8R1F5 277 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 JcadQ5DTX6 1320 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Sec14l1A8Y5H7 715 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 NpcdF8VQB8 469 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 NeblQ0II04 452 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Rnf40Q3U319 1001 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 Krit1Q6S5J6 736 aa12.64□□□□□ -0.39
Vps54-201ENSMUST00000006221 NkrfQ8BY02 690 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms