RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W AFG3P39925 761 aa3.53□□□□□ -1.84
VPS38YLR360W YEL068CP39977 110 aa3.53□□□□□ -1.84
VPS38YLR360W OPY2Q06810 360 aa3.53□□□□□ -1.84
VPS38YLR360W FMP45Q07651 309 aa3.53□□□□□ -1.84
VPS38YLR360W ERG1P32476 496 aaKnown RBP3.52□□□□□ -1.85
VPS38YLR360W CCT4P39078 528 aaKnown RBP3.52□□□□□ -1.85
VPS38YLR360W YJL070CP40361 888 aa3.52□□□□□ -1.85
VPS38YLR360W YJL068CP40363 299 aa3.52□□□□□ -1.85
VPS38YLR360W AXL1P40851 1208 aa3.52□□□□□ -1.85
VPS38YLR360W TDA7P53882 636 aaPredicted RBP3.52□□□□□ -1.85
VPS38YLR360W CRZ1P53968 678 aa3.52□□□□□ -1.85
VPS38YLR360W YMR160WQ03823 816 aa3.52□□□□□ -1.85
VPS38YLR360W SSK1Q07084 712 aa3.52□□□□□ -1.85
VPS38YLR360W KGD1P20967 1014 aaKnown RBP3.51□□□□□ -1.85
VPS38YLR360W YCK1P23291 538 aa3.51□□□□□ -1.85
VPS38YLR360W SNC1P31109 117 aa3.51□□□□□ -1.85
VPS38YLR360W MUD2P36084 527 aaKnown RBP3.51□□□□□ -1.85
VPS38YLR360W ICS2P38284 255 aa3.51□□□□□ -1.85
VPS38YLR360W LCL3P53153 274 aa3.51□□□□□ -1.85
VPS38YLR360W SMM1P53720 384 aaKnown RBP3.51□□□□□ -1.85
VPS38YLR360W DUG3P53871 357 aa3.51□□□□□ -1.85
VPS38YLR360W BUD22Q04347 519 aaKnown RBP3.51□□□□□ -1.85
VPS38YLR360W TMA64Q04600 565 aaKnown RBP3.51□□□□□ -1.85
VPS38YLR360W DAP1Q12091 152 aa3.51□□□□□ -1.85
VPS38YLR360W ARD1P07347 238 aaPredicted RBP3.5□□□□□ -1.85
VPS38YLR360W YML002WP0CF17 737 aa3.5□□□□□ -1.85
VPS38YLR360W PDA1P16387 420 aaKnown RBP3.5□□□□□ -1.85
VPS38YLR360W POL4P25615 582 aa3.5□□□□□ -1.85
VPS38YLR360W CMK1P27466 446 aaKnown RBP3.5□□□□□ -1.85
VPS38YLR360W CHS3P29465 1165 aa3.5□□□□□ -1.85
VPS38YLR360W LAG1P38703 411 aa3.5□□□□□ -1.85
VPS38YLR360W YER130CP39959 443 aa3.5□□□□□ -1.85
VPS38YLR360W PYK2P52489 506 aaKnown RBP3.5□□□□□ -1.85
VPS38YLR360W YGL082WP53155 381 aa3.5□□□□□ -1.85
VPS38YLR360W YGR127WP53275 312 aa3.5□□□□□ -1.85
VPS38YLR360W YVH1Q02256 364 aaKnown RBP3.5□□□□□ -1.85
VPS38YLR360W YML037CQ03703 340 aa3.5□□□□□ -1.85
VPS38YLR360W MSS11Q03825 758 aa3.5□□□□□ -1.85
VPS38YLR360W YEH2Q07950 538 aa3.5□□□□□ -1.85
VPS38YLR360W HUA2Q12134 243 aa3.5□□□□□ -1.85
VPS38YLR360W PDH1Q12428 516 aaKnown RBP3.5□□□□□ -1.85
VPS38YLR360W ARP6Q12509 438 aa3.5□□□□□ -1.85
VPS38YLR360W YBR126W-AQ8TGU7 68 aa3.5□□□□□ -1.85
VPS38YLR360W PHO2P07269 559 aa3.49□□□□□ -1.85
VPS38YLR360W CDC16P09798 840 aa3.49□□□□□ -1.85
VPS38YLR360W PMS1P14242 873 aa3.49□□□□□ -1.85
VPS38YLR360W BOS1P25385 244 aa3.49□□□□□ -1.85
VPS38YLR360W PRO3P32263 286 aaKnown RBP3.49□□□□□ -1.85
VPS38YLR360W ACH1P32316 526 aa3.49□□□□□ -1.85
VPS38YLR360W YKL100CP34248 587 aa3.49□□□□□ -1.85
VPS38YLR360W YNK1P36010 153 aaKnown RBP3.49□□□□□ -1.85
VPS38YLR360W UBP11P36026 717 aa3.49□□□□□ -1.85
VPS38YLR360W SPC34P36131 295 aa3.49□□□□□ -1.85
VPS38YLR360W VID27P40157 782 aa3.49□□□□□ -1.85
VPS38YLR360W DIM1P41819 318 aaKnown RBP3.49□□□□□ -1.85
VPS38YLR360W FAR3P46671 204 aa3.49□□□□□ -1.85
VPS38YLR360W EFM6P53970 246 aa3.49□□□□□ -1.85
VPS38YLR360W YPL014WQ02606 381 aa3.49□□□□□ -1.85
VPS38YLR360W YTH1Q06102 208 aaPredicted RBP3.49□□□□□ -1.85
VPS38YLR360W DIC1Q06143 298 aa3.49□□□□□ -1.85
VPS38YLR360W RTT109Q07794 436 aa3.49□□□□□ -1.85
VPS38YLR360W ENT1Q12518 454 aa3.49□□□□□ -1.85
VPS38YLR360W YMR230W-AQ3E7B5 62 aa3.49□□□□□ -1.85
VPS38YLR360W MF(ALPHA)1P01149 165 aa3.48□□□□□ -1.85
VPS38YLR360W RPL19AP0CX82 189 aaKnown RBP3.48□□□□□ -1.85
VPS38YLR360W RPL19BP0CX83 189 aaPredicted RBP3.48□□□□□ -1.85
VPS38YLR360W IMG1P25626 169 aa3.48□□□□□ -1.85
VPS38YLR360W YIH1P25637 258 aa3.48□□□□□ -1.85
VPS38YLR360W SYN8P31377 255 aa3.48□□□□□ -1.85
VPS38YLR360W RGT1P32862 1170 aa3.48□□□□□ -1.85
VPS38YLR360W YBL055CP34220 418 aaPredicted RBP3.48□□□□□ -1.85
VPS38YLR360W RPL32P38061 130 aaKnown RBP3.48□□□□□ -1.85
VPS38YLR360W GUF1P46943 645 aa3.48□□□□□ -1.85
VPS38YLR360W DUO1P53168 247 aaKnown RBP3.48□□□□□ -1.85
VPS38YLR360W LUC7Q07508 261 aaPredicted RBP3.48□□□□□ -1.85
VPS38YLR360W ETT1Q08421 412 aaKnown RBP3.48□□□□□ -1.85
VPS38YLR360W KAR3P17119 729 aa3.47□□□□□ -1.85
VPS38YLR360W TYR1P20049 452 aa3.47□□□□□ -1.85
VPS38YLR360W SEC62P21825 274 aa3.47□□□□□ -1.85
VPS38YLR360W BUD5P25300 642 aaPredicted RBP3.47□□□□□ -1.85
VPS38YLR360W RPS2P25443 254 aaKnown RBP3.47□□□□□ -1.85
VPS38YLR360W PUP3P25451 205 aaKnown RBP3.47□□□□□ -1.85
VPS38YLR360W SSE2P32590 693 aaKnown RBP3.47□□□□□ -1.85
VPS38YLR360W YBR144CP34215 104 aa3.47□□□□□ -1.85
VPS38YLR360W MTR2P34232 184 aaKnown RBP3.47□□□□□ -1.85
VPS38YLR360W SNG1P46950 547 aa3.47□□□□□ -1.85
VPS38YLR360W IKS1P47042 667 aa3.47□□□□□ -1.85
VPS38YLR360W SAM50P53969 484 aa3.47□□□□□ -1.85
VPS38YLR360W RBA50Q04418 439 aa3.47□□□□□ -1.85
VPS38YLR360W SPE4Q12455 300 aa3.47□□□□□ -1.85
VPS38YLR360W VPS17P32913 551 aa3.46□□□□□ -1.85
VPS38YLR360W SHR3Q02774 210 aa3.46□□□□□ -1.85
VPS38YLR360W GLO2Q05584 274 aa3.46□□□□□ -1.85
VPS38YLR360W YDL057WQ07379 328 aa3.46□□□□□ -1.85
VPS38YLR360W FMP40Q08968 688 aaPredicted RBP3.46□□□□□ -1.85
VPS38YLR360W YDR056CQ12025 205 aa3.46□□□□□ -1.85
VPS38YLR360W EST1P17214 699 aaPredicted RBP3.45□□□□□ -1.86
VPS38YLR360W NUP133P36161 1157 aa3.45□□□□□ -1.86
VPS38YLR360W YGR126WP53274 230 aa3.45□□□□□ -1.86
VPS38YLR360W NGL3Q03210 505 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms