RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W RRG1Q12167 365 aaPredicted RBP1.47□□□□□ -2.17
SLX4YLR135W SEC39Q12745 709 aa1.47□□□□□ -2.17
SLX4YLR135W ARG81P05085 880 aa1.47□□□□□ -2.17
SLX4YLR135W PDA1P16387 420 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W PDX1P16451 410 aa1.47□□□□□ -2.17
SLX4YLR135W CLC1P17891 233 aa1.47□□□□□ -2.17
SLX4YLR135W YCR006CP25350 157 aa1.47□□□□□ -2.17
SLX4YLR135W BOS1P25385 244 aa1.47□□□□□ -2.17
SLX4YLR135W IMG1P25626 169 aa1.47□□□□□ -2.17
SLX4YLR135W CMC1P36064 111 aa1.47□□□□□ -2.17
SLX4YLR135W BYE1P36106 594 aa1.47□□□□□ -2.17
SLX4YLR135W DBP8P38719 431 aa1.47□□□□□ -2.17
SLX4YLR135W UBA4P38820 440 aa1.47□□□□□ -2.17
SLX4YLR135W CIN4P39110 191 aa1.47□□□□□ -2.17
SLX4YLR135W PHO90P39535 881 aa1.47□□□□□ -2.17
SLX4YLR135W LTP1P40347 161 aa1.47□□□□□ -2.17
SLX4YLR135W ULP2P40537 1034 aaPredicted RBP1.47□□□□□ -2.17
SLX4YLR135W RPS10BP46784 105 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W PET130P47065 347 aa1.47□□□□□ -2.17
SLX4YLR135W IMD4P50094 524 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W YML6P51998 286 aa1.47□□□□□ -2.17
SLX4YLR135W RSC9Q03124 581 aa1.47□□□□□ -2.17
SLX4YLR135W ADE13Q05911 482 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W ECM22Q05958 814 aaPredicted RBP1.47□□□□□ -2.17
SLX4YLR135W TEN1Q07921 160 aa1.47□□□□□ -2.17
SLX4YLR135W RIM20Q12033 661 aa1.47□□□□□ -2.17
SLX4YLR135W RLM1Q12224 676 aa1.47□□□□□ -2.17
SLX4YLR135W FRE7Q12333 620 aa1.47□□□□□ -2.17
SLX4YLR135W SGS1P35187 1447 aa1.47□□□□□ -2.17
SLX4YLR135W YER145C-AA0A023PYF4 145 aa1.46□□□□□ -2.18
SLX4YLR135W GAL80P04387 435 aa1.46□□□□□ -2.18
SLX4YLR135W CBP1P07252 654 aa1.46□□□□□ -2.18
SLX4YLR135W ERG11P10614 530 aa1.46□□□□□ -2.18
SLX4YLR135W PMS1P14242 873 aa1.46□□□□□ -2.18
SLX4YLR135W EST1P17214 699 aaPredicted RBP1.46□□□□□ -2.18
SLX4YLR135W ART10P18634 518 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W SUI2P20459 304 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W APN1P22936 367 aa1.46□□□□□ -2.18
SLX4YLR135W URE2P23202 354 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W CLB3P24870 427 aa1.46□□□□□ -2.18
SLX4YLR135W SNT1P25357 1226 aa1.46□□□□□ -2.18
SLX4YLR135W BUD14P27637 709 aa1.46□□□□□ -2.18
SLX4YLR135W GPI10P30777 616 aa1.46□□□□□ -2.18
SLX4YLR135W AFG3P39925 761 aa1.46□□□□□ -2.18
SLX4YLR135W SGN1P40561 250 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SLX4YLR135W GPD2P41911 440 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W IRC8P47046 822 aa1.46□□□□□ -2.18
SLX4YLR135W COP1P53622 1201 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W YNL144CP53907 740 aa1.46□□□□□ -2.18
SLX4YLR135W ERG13P54839 491 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W CTL1Q03220 320 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W YDR131CQ03899 556 aa1.46□□□□□ -2.18
SLX4YLR135W EMI2Q04409 500 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W GRC3Q07845 632 aa1.46□□□□□ -2.18
SLX4YLR135W RPS10AQ08745 105 aaPredicted RBP1.46□□□□□ -2.18
SLX4YLR135W PFA4Q12006 378 aa1.46□□□□□ -2.18
SLX4YLR135W RRI1Q12468 440 aa1.46□□□□□ -2.18
SLX4YLR135W YDL007C-AQ2V2Q0 85 aa1.46□□□□□ -2.18
SLX4YLR135W HSP82P02829 709 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W GAL4P04386 881 aa1.46□□□□□ -2.18
SLX4YLR135W YMR085WP0CF18 432 aa1.46□□□□□ -2.18
SLX4YLR135W MRP13P12686 339 aa1.46□□□□□ -2.18
SLX4YLR135W RFC1P38630 861 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W LEU5P38702 357 aa1.46□□□□□ -2.18
SLX4YLR135W YHR210CP38893 341 aa1.46□□□□□ -2.18
SLX4YLR135W HXT14P42833 540 aa1.46□□□□□ -2.18
SLX4YLR135W PTR3P43606 678 aa1.46□□□□□ -2.18
SLX4YLR135W ALK1P43633 760 aaKnown RBP1.46□□□□□ -2.18
SLX4YLR135W YJR154WP47181 346 aa1.46□□□□□ -2.18
SLX4YLR135W RPA49Q01080 415 aaPredicted RBP1.46□□□□□ -2.18
SLX4YLR135W YMR155WQ03795 547 aa1.46□□□□□ -2.18
SLX4YLR135W RPC11Q04307 110 aaPredicted RBP1.46□□□□□ -2.18
SLX4YLR135W TAP42Q04372 366 aa1.46□□□□□ -2.18
SLX4YLR135W ARP10Q04549 284 aa1.46□□□□□ -2.18
SLX4YLR135W FRE3Q08905 711 aa1.46□□□□□ -2.18
SLX4YLR135W NCE102Q12207 173 aaRIP-Chip data1.46□□□□□ -2.18not detected
SLX4YLR135W YOL159C-AQ3E769 90 aa1.46□□□□□ -2.18
SLX4YLR135W YPT1P01123 206 aaKnown RBP1.45□□□□□ -2.18
SLX4YLR135W VMA8P32610 256 aaKnown RBP1.45□□□□□ -2.18
SLX4YLR135W MTR2P34232 184 aaKnown RBP1.45□□□□□ -2.18
SLX4YLR135W PIM1P36775 1133 aa1.45□□□□□ -2.18
SLX4YLR135W RPL32P38061 130 aaKnown RBP1.45□□□□□ -2.18
SLX4YLR135W ICS2P38284 255 aa1.45□□□□□ -2.18
SLX4YLR135W MSR1P38714 643 aa1.45□□□□□ -2.18
SLX4YLR135W YJL068CP40363 299 aa1.45□□□□□ -2.18
SLX4YLR135W DOT5P40553 215 aa1.45□□□□□ -2.18
SLX4YLR135W HXT9P40885 567 aa1.45□□□□□ -2.18
SLX4YLR135W MAF1P41910 395 aa1.45□□□□□ -2.18
SLX4YLR135W PSA1P41940 361 aaKnown RBP1.45□□□□□ -2.18
SLX4YLR135W BNA3P47039 444 aaKnown RBP1.45□□□□□ -2.18
SLX4YLR135W IPI3P53877 555 aa1.45□□□□□ -2.18
SLX4YLR135W SLG1P54867 378 aa1.45□□□□□ -2.18
SLX4YLR135W RIM13Q03792 727 aa1.45□□□□□ -2.18
SLX4YLR135W COQ9Q05779 260 aa1.45□□□□□ -2.18
SLX4YLR135W VTA1Q06263 330 aa1.45□□□□□ -2.18
SLX4YLR135W MCP2Q06567 569 aa1.45□□□□□ -2.18
SLX4YLR135W CDC45Q08032 650 aa1.45□□□□□ -2.18
SLX4YLR135W YOR365CQ08844 703 aa1.45□□□□□ -2.18
SLX4YLR135W CRC1Q12289 327 aa1.45□□□□□ -2.18
SLX4YLR135W ISN1Q99312 450 aa1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms