RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C EMP46Q12396 444 aa2.36□□□□□ -2.03
VPS13YLL040C ERP3Q12403 225 aa2.36□□□□□ -2.03
VPS13YLL040C SWM2P40342 146 aa2.35□□□□□ -2.03
VPS13YLL040C PMT4P46971 762 aa2.35□□□□□ -2.03
VPS13YLL040C NAN1Q02931 896 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C DOT1Q04089 582 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C BCH1Q05029 724 aa2.35□□□□□ -2.03
VPS13YLL040C ARR1Q06596 294 aa2.35□□□□□ -2.03
VPS13YLL040C SPO73P40031 143 aa2.35□□□□□ -2.03
VPS13YLL040C PEX10Q05568 337 aa2.35□□□□□ -2.03
VPS13YLL040C THP1Q08231 455 aa2.35□□□□□ -2.03
VPS13YLL040C SOG2Q08817 791 aa2.35□□□□□ -2.03
VPS13YLL040C GPB1Q08886 897 aa2.35□□□□□ -2.03
VPS13YLL040C CAN1P04817 590 aa2.35□□□□□ -2.03
VPS13YLL040C SUR1P33300 382 aa2.35□□□□□ -2.03
VPS13YLL040C FLC2P39719 783 aa2.35□□□□□ -2.03
VPS13YLL040C SIW14P53965 281 aa2.35□□□□□ -2.03
VPS13YLL040C TGL2P54857 326 aa2.35□□□□□ -2.03
VPS13YLL040C MDM36Q06820 579 aa2.35□□□□□ -2.03
VPS13YLL040C SSK1Q07084 712 aa2.35□□□□□ -2.03
VPS13YLL040C GAL80P04387 435 aa2.35□□□□□ -2.03
VPS13YLL040C SEC12P11655 471 aa2.35□□□□□ -2.03
VPS13YLL040C NDT80P38830 627 aa2.35□□□□□ -2.03
VPS13YLL040C AST2P39945 430 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C GAB1P41733 394 aa2.35□□□□□ -2.03
VPS13YLL040C YGR012WP53206 393 aa2.35□□□□□ -2.03
VPS13YLL040C EFM6P53970 246 aa2.35□□□□□ -2.03
VPS13YLL040C SPR6Q01684 191 aa2.35□□□□□ -2.03
VPS13YLL040C NHP10Q03435 203 aa2.35□□□□□ -2.03
VPS13YLL040C AIM36Q03798 255 aa2.35□□□□□ -2.03
VPS13YLL040C SPO20Q04359 397 aa2.35□□□□□ -2.03
VPS13YLL040C THP3Q12049 470 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C HAP2P06774 265 aa2.35□□□□□ -2.03
VPS13YLL040C PDC5P16467 563 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C COX13P32799 129 aa2.35□□□□□ -2.03
VPS13YLL040C ACA1P39970 489 aa2.35□□□□□ -2.03
VPS13YLL040C BNA3P47039 444 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C JHD2P47156 728 aaPredicted RBP2.35□□□□□ -2.03
VPS13YLL040C YPL034WQ03083 165 aa2.35□□□□□ -2.03
VPS13YLL040C VPS36Q06696 566 aa2.35□□□□□ -2.03
VPS13YLL040C MED2Q12124 431 aa2.35□□□□□ -2.03
VPS13YLL040C RRP42Q12277 265 aaPredicted RBP2.35□□□□□ -2.03
VPS13YLL040C DCP1Q12517 231 aaPredicted RBP2.35□□□□□ -2.03
VPS13YLL040C ISN1Q99312 450 aa2.35□□□□□ -2.03
VPS13YLL040C NFT1P0CE68 1218 aa2.35□□□□□ -2.03
VPS13YLL040C PHO3P24031 467 aa2.35□□□□□ -2.03
VPS13YLL040C NAT2P37293 288 aa2.35□□□□□ -2.03
VPS13YLL040C IDS2P46958 469 aa2.35□□□□□ -2.03
VPS13YLL040C LYS4P49367 693 aaPredicted RBP2.35□□□□□ -2.03
VPS13YLL040C SAP4P53036 818 aa2.35□□□□□ -2.03
VPS13YLL040C MPC1P53157 130 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C DIP5P53388 608 aa2.35□□□□□ -2.03
VPS13YLL040C YDR124WQ04608 324 aa2.35□□□□□ -2.03
VPS13YLL040C NEJ1Q06148 342 aa2.35□□□□□ -2.03
VPS13YLL040C YEH1Q07804 573 aa2.35□□□□□ -2.03
VPS13YLL040C TEF1P02994 458 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C DGR2P32330 852 aa2.35□□□□□ -2.03
VPS13YLL040C TOD6P34219 525 aa2.35□□□□□ -2.03
VPS13YLL040C RMA1P36001 430 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C EGD2P38879 174 aaKnown RBP2.35□□□□□ -2.03
VPS13YLL040C AAD14P42884 376 aa2.35□□□□□ -2.03
VPS13YLL040C STB4P50104 949 aa2.35□□□□□ -2.03
VPS13YLL040C SPC105P53148 917 aa2.35□□□□□ -2.03
VPS13YLL040C CWC24P53769 259 aa2.35□□□□□ -2.03
VPS13YLL040C PLM2Q04383 521 aa2.35□□□□□ -2.03
VPS13YLL040C YLR012CQ07927 99 aa2.35□□□□□ -2.03
VPS13YLL040C LAG2Q92325 660 aa2.35□□□□□ -2.03
VPS13YLL040C MDM12Q92328 271 aa2.35□□□□□ -2.03
VPS13YLL040C SGV1P23293 657 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C PUP3P25451 205 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C STE14P32584 239 aa2.34□□□□□ -2.03
VPS13YLL040C RIM101P33400 625 aa2.34□□□□□ -2.03
VPS13YLL040C THI80P35202 319 aa2.34□□□□□ -2.03
VPS13YLL040C YKL063CP35725 167 aa2.34□□□□□ -2.03
VPS13YLL040C TEF4P36008 412 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C MRPL7P36519 292 aa2.34□□□□□ -2.03
VPS13YLL040C SAW1P39735 261 aa2.34□□□□□ -2.03
VPS13YLL040C HOC1P47124 396 aa2.34□□□□□ -2.03
VPS13YLL040C IMD3P50095 523 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C ALG11P53954 548 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C GIP3Q03016 1276 aa2.34□□□□□ -2.03
VPS13YLL040C ATP25Q03153 612 aa2.34□□□□□ -2.03
VPS13YLL040C YMR111CQ04461 462 aaPredicted RBP2.34□□□□□ -2.03
VPS13YLL040C AI5_ALPHAQ9ZZX1 630 aa2.34□□□□□ -2.03
VPS13YLL040C MDM35O60200 86 aa2.34□□□□□ -2.03
VPS13YLL040C HEM2P05373 342 aa2.34□□□□□ -2.03
VPS13YLL040C BCS1P32839 456 aa2.34□□□□□ -2.03
VPS13YLL040C RPC34P32910 317 aa2.34□□□□□ -2.03
VPS13YLL040C PBP2P38151 413 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
VPS13YLL040C BIT2P38346 545 aa2.34□□□□□ -2.03
VPS13YLL040C PPE1P38796 400 aa2.34□□□□□ -2.03
VPS13YLL040C GCD10P41814 478 aa2.34□□□□□ -2.03
VPS13YLL040C HSH155P49955 971 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C YNL033WP53964 284 aa2.34□□□□□ -2.03
VPS13YLL040C YNL019CP53975 284 aa2.34□□□□□ -2.03
VPS13YLL040C SEC13Q04491 297 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C GAD1Q04792 585 aa2.34□□□□□ -2.03
VPS13YLL040C MCA1Q08601 432 aa2.34□□□□□ -2.03
VPS13YLL040C LAT1P12695 482 aaKnown RBP2.34□□□□□ -2.03
VPS13YLL040C TAH1P25638 111 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms