RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	TMA108	P40462	946 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	AZF1	P41696	914 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	STB2	P46679	850 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	TDA9	Q04545	1251 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	NRT1	Q08485	598 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	CDC16	P09798	840 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	YFL068W	P0CX99	160 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	YLL066W-A	P0CY00	160 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	YLL067W-A	P0CY01	160 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	GID7	P25569	745 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	POL4	P25615	582 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	RPN2	P32565	945 aa	Known RBP	3.1	□□□□□ -1.91
VHR1	YIL056W	YNK1	P36010	153 aa	Known RBP	3.1	□□□□□ -1.91
VHR1	YIL056W	UBP11	P36026	717 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	MIC60	P36112	540 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	SIP4	P46954	829 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	LCL3	P53153	274 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	ERG26	P53199	349 aa	Known RBP	3.1	□□□□□ -1.91
VHR1	YIL056W	RSM23	Q01163	450 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	RSF1	Q05043	376 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	SSK1	Q07084	712 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	CSR2	Q12734	1121 aa		3.1	□□□□□ -1.91
VHR1	YIL056W	YCK1	P23291	538 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	YIH1	P25637	258 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	PEP3	P27801	918 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	EBP2	P36049	427 aa	Known RBP	3.09	□□□□□ -1.91
VHR1	YIL056W	TSC10	P38342	320 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	ATG27	P46989	271 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	SGM1	P47166	707 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	CUL3	P53202	744 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	SOL4	P53315	255 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	YMR160W	Q03823	816 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	BSC1	Q12140	328 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	RTP1	Q12751	981 aa		3.09	□□□□□ -1.91
VHR1	YIL056W	INH1	P01097	85 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	MF(ALPHA)1	P01149	165 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	SEC53	P07283	254 aa	Known RBP	3.09	□□□□□ -1.92
VHR1	YIL056W	PGS1	P25578	521 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	CMK1	P27466	446 aa	Known RBP	3.09	□□□□□ -1.92
VHR1	YIL056W	JNM1	P36224	373 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	YJL068C	P40363	299 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	AXL1	P40851	1208 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	FAR3	P46671	204 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	CDC45	Q08032	650 aa		3.09	□□□□□ -1.92
VHR1	YIL056W	APL5	Q08951	932 aa	Known RBP	3.09	□□□□□ -1.92
VHR1	YIL056W	YPT1	P01123	206 aa	Known RBP	3.08	□□□□□ -1.92
VHR1	YIL056W	BOS1	P25385	244 aa		3.08	□□□□□ -1.92
VHR1	YIL056W	IMG1	P25626	169 aa		3.08	□□□□□ -1.92
VHR1	YIL056W	PHD1	P36093	366 aa		3.08	□□□□□ -1.92
VHR1	YIL056W	LEU5	P38702	357 aa		3.08	□□□□□ -1.92
VHR1	YIL056W	RGI2	P40188	164 aa		3.08	□□□□□ -1.92
VHR1	YIL056W	YGL260W	P53056	76 aa		3.08	□□□□□ -1.92
VHR1	YIL056W	DUO1	P53168	247 aa	Known RBP	3.08	□□□□□ -1.92
VHR1	YIL056W	SMM1	P53720	384 aa	Known RBP	3.08	□□□□□ -1.92
VHR1	YIL056W	ARD1	P07347	238 aa	Predicted RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	SUI2	P20459	304 aa	Known RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	RTT107	P38850	1070 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	SRB7	P47822	140 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	LYS4	P49367	693 aa	Predicted RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	SXM1	Q04175	944 aa	Known RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	ADE13	Q05911	482 aa	Known RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	NOP58	Q12499	511 aa	Known RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	BAR1	P12630	587 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	EST1	P17214	699 aa	Predicted RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	PPZ1	P26570	692 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	SNC1	P31109	117 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	PRO3	P32263	286 aa	Known RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	RPL32	P38061	130 aa	Known RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	REG2	P38232	338 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	LAG1	P38703	411 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	PHO90	P39535	881 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	NDE1	P40215	560 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	PKP2	P53170	491 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	TDA7	P53882	636 aa	Predicted RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	NUP100	Q02629	959 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	LUC7	Q07508	261 aa	Predicted RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	FMP45	Q07651	309 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	FMP40	Q08968	688 aa	Predicted RBP	3.07	□□□□□ -1.92
VHR1	YIL056W	YDR056C	Q12025	205 aa		3.07	□□□□□ -1.92
VHR1	YIL056W	CDC31	P06704	161 aa	Known RBP	3.06	□□□□□ -1.92
VHR1	YIL056W	PUT2	P07275	575 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	PAH1	P32567	862 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	YKL100C	P34248	587 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	UBA4	P38820	440 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	PES4	P39684	611 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	YND1	P40009	630 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	YIR014W	P40570	242 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	IPI3	P53877	555 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	CRZ1	P53968	678 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	GLO2	Q05584	274 aa		3.06	□□□□□ -1.92
VHR1	YIL056W	TY1B-A	O13527	1196 aa	Known RBP	3.05	□□□□□ -1.92
VHR1	YIL056W	GLN3	P18494	730 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	SAN1	P22470	610 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	YBR144C	P34215	104 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	RIM2	P38127	377 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	MAF1	P41910	395 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	SNG1	P46950	547 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	VID30	P53076	958 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	RSC1	P53236	928 aa		3.05	□□□□□ -1.92
VHR1	YIL056W	YGR126W	P53274	230 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms