RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W RGI2P40188 164 aa2.42□□□□□ -2.02
TRA1YHR099W LSM1P47017 172 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W PHO23P50947 330 aa2.42□□□□□ -2.02
TRA1YHR099W GDE1Q02979 1223 aa2.42□□□□□ -2.02
TRA1YHR099W VHS1Q03785 461 aa2.42□□□□□ -2.02
TRA1YHR099W CSR1Q06705 408 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W EST1P17214 699 aaPredicted RBP2.42□□□□□ -2.02
TRA1YHR099W COS9P36034 407 aa2.42□□□□□ -2.02
TRA1YHR099W SET5P38890 526 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W CFD1P40558 293 aa2.42□□□□□ -2.02
TRA1YHR099W MET13P53128 600 aa2.42□□□□□ -2.02
TRA1YHR099W YGR250CP53316 781 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W MDM35O60200 86 aa2.42□□□□□ -2.02
TRA1YHR099W RPS23AP0CX29 145 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W RPS23BP0CX30 145 aa2.42□□□□□ -2.02
TRA1YHR099W FYV5P25585 152 aa2.42□□□□□ -2.02
TRA1YHR099W CSM1P25651 190 aa2.42□□□□□ -2.02
TRA1YHR099W SYN8P31377 255 aa2.42□□□□□ -2.02
TRA1YHR099W SEF1P34228 1148 aa2.42□□□□□ -2.02
TRA1YHR099W SCS2P40075 244 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W VPS70P47161 811 aa2.42□□□□□ -2.02
TRA1YHR099W SSL2Q00578 843 aa2.42□□□□□ -2.02
TRA1YHR099W HLR1Q04429 423 aa2.42□□□□□ -2.02
TRA1YHR099W YPL272CQ08984 517 aa2.42□□□□□ -2.02
TRA1YHR099W ERR1P0CX10 437 aa2.42□□□□□ -2.02
TRA1YHR099W ERR2P0CX11 437 aa2.42□□□□□ -2.02
TRA1YHR099W COS2P0CX12 379 aa2.42□□□□□ -2.02
TRA1YHR099W COS3P0CX13 379 aa2.42□□□□□ -2.02
TRA1YHR099W PUF4P25339 888 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02 RIP-Chip
TRA1YHR099W ADD66P36040 267 aa2.42□□□□□ -2.02
TRA1YHR099W SER3P40054 469 aa2.42□□□□□ -2.02
TRA1YHR099W RPL34BP40525 121 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W ERR3P42222 437 aa2.42□□□□□ -2.02
TRA1YHR099W FAA4P47912 694 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W RPS12P48589 143 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W NAS6P50086 228 aa2.42□□□□□ -2.02
TRA1YHR099W MPA43P53583 542 aaPredicted RBP2.42□□□□□ -2.02
TRA1YHR099W RTN1Q04947 295 aaKnown RBP2.42□□□□□ -2.02
TRA1YHR099W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
TRA1YHR099W YOR114WQ12219 294 aa2.42□□□□□ -2.02
TRA1YHR099W SPO24Q3E752 67 aa2.42□□□□□ -2.02
TRA1YHR099W PCT1P13259 424 aa2.41□□□□□ -2.02
TRA1YHR099W CBP3P21560 335 aa2.41□□□□□ -2.02
TRA1YHR099W GSY2P27472 705 aa2.41□□□□□ -2.02
TRA1YHR099W UGP1P32861 499 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W ELF1P36053 145 aa2.41□□□□□ -2.02
TRA1YHR099W ARC35P53731 342 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W HOF1Q05080 669 aa2.41□□□□□ -2.02
TRA1YHR099W TY1A-BRQ12217 440 aa2.41□□□□□ -2.02
TRA1YHR099W PRC1P00729 532 aa2.41□□□□□ -2.02
TRA1YHR099W RPL24AP04449 155 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W HMG1P12683 1054 aa2.41□□□□□ -2.02
TRA1YHR099W YAP1P19880 650 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W CLB6P32943 380 aa2.41□□□□□ -2.02
TRA1YHR099W SPT10P35208 640 aa2.41□□□□□ -2.02
TRA1YHR099W MAE1P36013 669 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W GLY1P37303 387 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W FAT1P38225 669 aa2.41□□□□□ -2.02
TRA1YHR099W NSG1P38837 291 aa2.41□□□□□ -2.02
TRA1YHR099W RMD6P39975 231 aa2.41□□□□□ -2.02
TRA1YHR099W YEL023CP39992 682 aa2.41□□□□□ -2.02
TRA1YHR099W NPP2P39997 493 aa2.41□□□□□ -2.02
TRA1YHR099W COG3P40094 801 aa2.41□□□□□ -2.02
TRA1YHR099W PCI8P40512 444 aa2.41□□□□□ -2.02
TRA1YHR099W PHB2P50085 310 aa2.41□□□□□ -2.02
TRA1YHR099W INP52P50942 1183 aa2.41□□□□□ -2.02
TRA1YHR099W YMR166CQ03829 368 aa2.41□□□□□ -2.02
TRA1YHR099W GIS3Q12418 502 aa2.41□□□□□ -2.02
TRA1YHR099W STB3Q12427 513 aa2.41□□□□□ -2.02
TRA1YHR099W PCC1Q3E833 88 aa2.41□□□□□ -2.02
TRA1YHR099W FOB1O13329 566 aa2.41□□□□□ -2.02
TRA1YHR099W TRP2P00899 507 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W ADK1P07170 222 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W KIN2P13186 1147 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W ANB1P19211 157 aa2.41□□□□□ -2.02
TRA1YHR099W SGF29P25554 259 aa2.41□□□□□ -2.02
TRA1YHR099W DPH2P32461 534 aa2.41□□□□□ -2.02
TRA1YHR099W VPS17P32913 551 aa2.41□□□□□ -2.02
TRA1YHR099W YRA2P36036 203 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
TRA1YHR099W HXT6P39003 570 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W HXT7P39004 570 aa2.41□□□□□ -2.02
TRA1YHR099W PMT6P42934 759 aa2.41□□□□□ -2.02
TRA1YHR099W YFL040WP43562 540 aa2.41□□□□□ -2.02
TRA1YHR099W RMD9P53140 646 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W LRS4Q04087 347 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W SMP3Q04174 516 aa2.41□□□□□ -2.02
TRA1YHR099W DPH6Q12429 685 aa2.41□□□□□ -2.02
TRA1YHR099W KTI11Q3E840 82 aa2.41□□□□□ -2.02
TRA1YHR099W MDM12Q92328 271 aa2.41□□□□□ -2.02
TRA1YHR099W ARG82P07250 355 aa2.41□□□□□ -2.02
TRA1YHR099W COR1P07256 457 aa2.41□□□□□ -2.02
TRA1YHR099W KTR2P33550 425 aa2.41□□□□□ -2.02
TRA1YHR099W MRPL10P36520 322 aa2.41□□□□□ -2.02
TRA1YHR099W FAA3P39002 694 aa2.41□□□□□ -2.02
TRA1YHR099W GIM4P40005 111 aaKnown RBP2.41□□□□□ -2.02
TRA1YHR099W YGL117WP53133 265 aa2.41□□□□□ -2.02
TRA1YHR099W SSU72P53538 206 aaPredicted RBP2.41□□□□□ -2.02
TRA1YHR099W SED5Q01590 340 aa2.41□□□□□ -2.02
TRA1YHR099W TOF2Q02208 771 aa2.41□□□□□ -2.02
TRA1YHR099W DIG1Q03063 452 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms