RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	NUP2	P32499	720 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	SRP101	P32916	621 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	PEX6	P33760	1030 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	CST26	P38226	397 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YBR259W	P38338	688 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YBR285W	P38354	144 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	TSL1	P38427	1098 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	CKB2	P38930	258 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
XKS1	YGR194C	FAA2	P39518	744 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YFL040W	P43562	540 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YJR054W	P47114	497 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	SPC105	P53148	917 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	TAM41	P53230	385 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YGR266W	P53326	701 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	RCF2	P53721	224 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	CUS2	P53830	285 aa	Predicted RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	VPS9	P54787	451 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	KAP95	Q06142	861 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	PSR1	Q07800	427 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	HSH49	Q99181	213 aa	Predicted RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	RGS2	Q99188	309 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	BI3	Q9ZZW7	517 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	FIG2	P25653	1609 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	RHO1	P06780	209 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	IMA3	P0CW40	589 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	IMA4	P0CW41	589 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	PMA2	P19657	947 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	CTR86	P25355	563 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	SPB1	P25582	841 aa	Predicted RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	RPS7A	P26786	190 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	ATP7	P30902	174 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	HEM12	P32347	362 aa	Predicted RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	SAC1	P32368	623 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	PHA2	P32452	334 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	CYS4	P32582	507 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	TMT1	P32643	299 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	RPC34	P32910	317 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	STV1	P37296	890 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YBL028C	P38202	106 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	RFS1	P38234	210 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	PCM1	P38628	557 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	YHR112C	P38716	378 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	GOS1	P38736	223 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	FIS1	P40515	155 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YRB2	P40517	327 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	ELP2	P42935	788 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	NOP19	P53317	196 aa	Predicted RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	ARC35	P53731	342 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	TLG1	Q03322	224 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	TAF11	Q04226	346 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YMR111C	Q04461	462 aa	Predicted RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	TMA10	Q06177	86 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	GMC2	Q06201	188 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	YEH2	Q07950	538 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	IMA2	Q08295	589 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	CUE5	Q08412	411 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	THP3	Q12049	470 aa	Known RBP	4.35	□□□□□ -1.71
XKS1	YGR194C	ULA1	Q12059	462 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	AI5_BETA	Q9ZZX0	354 aa		4.35	□□□□□ -1.71
XKS1	YGR194C	MET17	P06106	444 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	HIS5	P07172	385 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	PUT2	P07275	575 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	BCY1	P07278	416 aa	Known RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	RAD18	P10862	487 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	RAP1	P11938	827 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	FBA1	P14540	359 aa	Known RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	RVS161	P25343	265 aa	Known RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	YJU2	P28320	278 aa	Predicted RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	URA10	P30402	227 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	SEC1	P30619	724 aa	Known RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	CRM1	P30822	1084 aa	Known RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	ACH1	P32316	526 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	MEI5	P32489	222 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	UBP11	P36026	717 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	YPK3	P38070	525 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	YHR078W	P38799	552 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	ECM10	P39987	644 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	FCY21	P40039	528 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	YER158C	P40095	573 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	CHA4	P43634	648 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	GLG2	P47011	380 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	SLT2	Q00772	484 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	DTD1	Q07648	150 aa	Known RBP	4.34	□□□□□ -1.71
XKS1	YGR194C	FMP25	Q08023	583 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	FLC1	Q08967	793 aa		4.34	□□□□□ -1.71
XKS1	YGR194C	CDC31	P06704	161 aa	Known RBP	4.33	□□□□□ -1.72
XKS1	YGR194C	SPE1	P08432	466 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	MSS18	P08593	268 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	MRP13	P12686	339 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	PHO81	P17442	1178 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	GDA1	P32621	518 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	YKU70	P32807	602 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	TYE7	P33122	291 aa	Predicted RBP	4.33	□□□□□ -1.72
XKS1	YGR194C	PTC1	P35182	281 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	CRP1	P38845	465 aa	Known RBP	4.33	□□□□□ -1.72
XKS1	YGR194C	PAC11	P40960	533 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	FAR7	P43592	221 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	COG5	P53951	403 aa		4.33	□□□□□ -1.72
XKS1	YGR194C	YNL010W	P53981	241 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms