RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C IAH1P41734 238 aa6.55□□□□□ -1.36
SHO1YER118C LOC1P43586 204 aaPredicted RBP6.55□□□□□ -1.36
SHO1YER118C RPA34P47006 233 aaPredicted RBP6.55□□□□□ -1.36
SHO1YER118C YGL138CP53122 345 aa6.55□□□□□ -1.36
SHO1YER118C YGR054WP53235 642 aaKnown RBP6.55□□□□□ -1.36
SHO1YER118C PRM1P53835 661 aa6.55□□□□□ -1.36
SHO1YER118C USA1Q03714 838 aa6.55□□□□□ -1.36
SHO1YER118C RBD2Q12270 262 aa6.55□□□□□ -1.36
SHO1YER118C ILV5P06168 395 aaKnown RBP6.54□□□□□ -1.36
SHO1YER118C STE3P06783 470 aa6.54□□□□□ -1.36
SHO1YER118C ILV2P07342 687 aaKnown RBP6.54□□□□□ -1.36
SHO1YER118C SPO7P18410 259 aa6.54□□□□□ -1.36
SHO1YER118C PPH22P23595 377 aa6.54□□□□□ -1.36
SHO1YER118C RRP1P35178 278 aaPredicted RBP6.54□□□□□ -1.36
SHO1YER118C MNN2P38069 597 aa6.54□□□□□ -1.36
SHO1YER118C TMN3P40071 706 aa6.54□□□□□ -1.36
SHO1YER118C URM1P40554 99 aaPredicted RBP6.54□□□□□ -1.36
SHO1YER118C YJL107CP42947 387 aa6.54□□□□□ -1.36
SHO1YER118C URB2P47108 1174 aa6.54□□□□□ -1.36
SHO1YER118C RPS7BP48164 190 aaKnown RBP6.54□□□□□ -1.36
SHO1YER118C YGL242CP53066 181 aa6.54□□□□□ -1.36
SHO1YER118C IMO32P53219 342 aa6.54□□□□□ -1.36
SHO1YER118C MPP6P53725 186 aaPredicted RBP6.54□□□□□ -1.36
SHO1YER118C TEX1P53851 422 aaKnown RBP6.54□□□□□ -1.36
SHO1YER118C UTP6Q02354 440 aaKnown RBP6.54□□□□□ -1.36
SHO1YER118C RRP45Q05636 305 aaKnown RBP6.54□□□□□ -1.36
SHO1YER118C YLR297WQ05899 129 aa6.54□□□□□ -1.36
SHO1YER118C YFT2Q06676 274 aa6.54□□□□□ -1.36
SHO1YER118C LDB17Q12342 491 aa6.54□□□□□ -1.36
SHO1YER118C SWM1Q12379 170 aa6.54□□□□□ -1.36
SHO1YER118C YBR255C-AQ3E776 120 aa6.54□□□□□ -1.36
SHO1YER118C SGS1P35187 1447 aa6.53□□□□□ -1.36
SHO1YER118C URA4P20051 364 aa6.53□□□□□ -1.36
SHO1YER118C CLN1P20437 546 aa6.53□□□□□ -1.36
SHO1YER118C PEX1P24004 1043 aa6.53□□□□□ -1.36
SHO1YER118C EMC1P25574 760 aa6.53□□□□□ -1.36
SHO1YER118C EFB1P32471 206 aaKnown RBP6.53□□□□□ -1.36
SHO1YER118C YME1P32795 747 aa6.53□□□□□ -1.36
SHO1YER118C MRPL37P36532 105 aa6.53□□□□□ -1.36
SHO1YER118C BZZ1P38822 633 aa6.53□□□□□ -1.36
SHO1YER118C TOM71P38825 639 aaKnown RBP6.53□□□□□ -1.36
SHO1YER118C YJL070CP40361 888 aa6.53□□□□□ -1.36
SHO1YER118C YIL077CP40508 320 aa6.53□□□□□ -1.36
SHO1YER118C STB2P46679 850 aa6.53□□□□□ -1.36
SHO1YER118C COP1P53622 1201 aaKnown RBP6.53□□□□□ -1.36
SHO1YER118C IPI3P53877 555 aa6.53□□□□□ -1.36
SHO1YER118C YAT1P80235 687 aa6.53□□□□□ -1.36
SHO1YER118C YDR179W-AQ03983 463 aa6.53□□□□□ -1.36
SHO1YER118C ARR1Q06596 294 aa6.53□□□□□ -1.36
SHO1YER118C FRE5Q08908 694 aa6.53□□□□□ -1.36
SHO1YER118C TAF3Q12297 353 aa6.53□□□□□ -1.36
SHO1YER118C STE2D6VTK4 431 aa6.52□□□□□ -1.37
SHO1YER118C CDC37P06101 506 aaKnown RBP6.52□□□□□ -1.37
SHO1YER118C MRP13P12686 339 aa6.52□□□□□ -1.37
SHO1YER118C PDE1P22434 369 aa6.52□□□□□ -1.37
SHO1YER118C PET18P25362 215 aa6.52□□□□□ -1.37
SHO1YER118C RDS1P25611 832 aa6.52□□□□□ -1.37
SHO1YER118C RFA2P26754 273 aaKnown RBP6.52□□□□□ -1.37
SHO1YER118C MSN4P33749 630 aa6.52□□□□□ -1.37
SHO1YER118C KEL1P38853 1164 aaKnown RBP6.52□□□□□ -1.37
SHO1YER118C FAD1P38913 306 aa6.52□□□□□ -1.37
SHO1YER118C NET1P47035 1189 aa6.52□□□□□ -1.37
SHO1YER118C COS5P47187 383 aa6.52□□□□□ -1.37
SHO1YER118C ADE13Q05911 482 aaKnown RBP6.52□□□□□ -1.37
SHO1YER118C BOP2Q06150 570 aa6.52□□□□□ -1.37
SHO1YER118C CRN1Q06440 651 aa6.52□□□□□ -1.37
SHO1YER118C COS7Q07788 383 aa6.52□□□□□ -1.37
SHO1YER118C SIL1Q08199 421 aa6.52□□□□□ -1.37
SHO1YER118C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
SHO1YER118C SFG1Q12507 346 aa6.52□□□□□ -1.37
SHO1YER118C CAR2P07991 424 aaKnown RBP6.51□□□□□ -1.37
SHO1YER118C ADH7P25377 361 aa6.51□□□□□ -1.37
SHO1YER118C FEN2P25621 512 aaKnown RBP6.51□□□□□ -1.37
SHO1YER118C ASF2P32448 525 aaPredicted RBP6.51□□□□□ -1.37
SHO1YER118C UGP1P32861 499 aaKnown RBP6.51□□□□□ -1.37
SHO1YER118C PEX7P39108 375 aa6.51□□□□□ -1.37
SHO1YER118C MMM1P41800 426 aa6.51□□□□□ -1.37
SHO1YER118C SWP82P43554 623 aa6.51□□□□□ -1.37
SHO1YER118C MSE1P48525 536 aa6.51□□□□□ -1.37
SHO1YER118C TOM22P49334 152 aa6.51□□□□□ -1.37
SHO1YER118C MCM6P53091 1017 aaKnown RBP6.51□□□□□ -1.37
SHO1YER118C PNC1P53184 216 aaKnown RBP6.51□□□□□ -1.37
SHO1YER118C HOP2P53187 214 aa6.51□□□□□ -1.37
SHO1YER118C YGR079WP53249 370 aa6.51□□□□□ -1.37
SHO1YER118C NRG1Q03125 231 aa6.51□□□□□ -1.37
SHO1YER118C ATC1Q04005 294 aa6.51□□□□□ -1.37
SHO1YER118C YMR130WQ04223 302 aa6.51□□□□□ -1.37
SHO1YER118C PDS5Q04264 1277 aa6.51□□□□□ -1.37
SHO1YER118C CSI1Q04368 295 aa6.51□□□□□ -1.37
SHO1YER118C TSR1Q07381 788 aaKnown RBP6.51□□□□□ -1.37
SHO1YER118C MED2Q12124 431 aa6.51□□□□□ -1.37
SHO1YER118C BUG1Q12191 341 aa6.51□□□□□ -1.37
SHO1YER118C NDJ1Q12366 352 aa6.51□□□□□ -1.37
SHO1YER118C YDL007C-AQ2V2Q0 85 aa6.51□□□□□ -1.37
SHO1YER118C SAM1P10659 382 aaKnown RBP6.5□□□□□ -1.37
SHO1YER118C CDC42P19073 191 aa6.5□□□□□ -1.37
SHO1YER118C ZTA1P38230 334 aaKnown RBP6.5□□□□□ -1.37
SHO1YER118C MSG5P38590 489 aa6.5□□□□□ -1.37
SHO1YER118C BUR6P40096 142 aa6.5□□□□□ -1.37
SHO1YER118C GCD14P46959 383 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms