RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C FUS3P16892 353 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C CDC12P32468 407 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C RAD24P32641 659 aa4.45□□□□□ -1.7
PRP28YDR243C PPG1P32838 368 aa4.45□□□□□ -1.7
PRP28YDR243C YET1P35723 206 aa4.45□□□□□ -1.7
PRP28YDR243C SCO2P38072 301 aa4.45□□□□□ -1.7
PRP28YDR243C STB5P38699 743 aa4.45□□□□□ -1.7
PRP28YDR243C SKN7P38889 622 aa4.45□□□□□ -1.7
PRP28YDR243C SLM1P40485 686 aa4.45□□□□□ -1.7
PRP28YDR243C DPH1P40487 425 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C GUS1P46655 708 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
PRP28YDR243C GLG2P47011 380 aa4.45□□□□□ -1.7
PRP28YDR243C EMC2P47133 292 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C YGR237CP50089 785 aa4.45□□□□□ -1.7
PRP28YDR243C TAF4P50105 388 aa4.45□□□□□ -1.7
PRP28YDR243C SLI1P53304 468 aa4.45□□□□□ -1.7
PRP28YDR243C ASI2P53895 289 aa4.45□□□□□ -1.7
PRP28YDR243C SNX41Q04053 625 aa4.45□□□□□ -1.7
PRP28YDR243C BUR2Q05949 395 aa4.45□□□□□ -1.7
PRP28YDR243C GPN3Q06543 272 aa4.45□□□□□ -1.7
PRP28YDR243C HAT1Q12341 374 aa4.45□□□□□ -1.7
PRP28YDR243C RRP12Q12754 1228 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C RPA190P10964 1664 aaKnown RBP4.45□□□□□ -1.7
PRP28YDR243C VTH1P40438 1549 aa4.44□□□□□ -1.7
PRP28YDR243C PHO5P00635 467 aa4.44□□□□□ -1.7
PRP28YDR243C GCN4P03069 281 aa4.44□□□□□ -1.7
PRP28YDR243C GAL10P04397 699 aa4.44□□□□□ -1.7
PRP28YDR243C PMA1P05030 918 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C CTT1P06115 562 aa4.44□□□□□ -1.7
PRP28YDR243C CAR2P07991 424 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C MAS1P10507 462 aa4.44□□□□□ -1.7
PRP28YDR243C PRP9P19736 530 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C CHS3P29465 1165 aa4.44□□□□□ -1.7
PRP28YDR243C CAM1P29547 415 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C HBS1P32769 611 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C MCM7P38132 845 aa4.44□□□□□ -1.7
PRP28YDR243C SRP72P38688 640 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C ATG7P38862 630 aa4.44□□□□□ -1.7
PRP28YDR243C PRM9P39551 298 aa4.44□□□□□ -1.7
PRP28YDR243C GIM4P40005 111 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C PCL7P40186 285 aa4.44□□□□□ -1.7
PRP28YDR243C TOK1P40310 691 aa4.44□□□□□ -1.7
PRP28YDR243C PFK26P40433 827 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C EAR1Q03212 550 aa4.44□□□□□ -1.7
PRP28YDR243C TY1A-DR2Q03964 440 aaKnown RBP4.44□□□□□ -1.7
PRP28YDR243C PLM2Q04383 521 aa4.44□□□□□ -1.7
PRP28YDR243C COS7Q07788 383 aa4.44□□□□□ -1.7
PRP28YDR243C RCL1Q08096 367 aaPredicted RBP4.44□□□□□ -1.7
PRP28YDR243C FRE5Q08908 694 aa4.44□□□□□ -1.7
PRP28YDR243C FMP40Q08968 688 aaPredicted RBP4.44□□□□□ -1.7
PRP28YDR243C LAP2Q10740 671 aa4.44□□□□□ -1.7
PRP28YDR243C ULA1Q12059 462 aa4.44□□□□□ -1.7
PRP28YDR243C PSF3Q12146 194 aa4.44□□□□□ -1.7
PRP28YDR243C YDR061WQ12298 539 aa4.44□□□□□ -1.7
PRP28YDR243C USO1P25386 1790 aa4.43□□□□□ -1.7
PRP28YDR243C VTH2P40890 1549 aa4.43□□□□□ -1.7
PRP28YDR243C RAD10P06838 210 aa4.43□□□□□ -1.7
PRP28YDR243C HPR1P17629 752 aaKnown RBP4.43□□□□□ -1.7
PRP28YDR243C SEC62P21825 274 aa4.43□□□□□ -1.7
PRP28YDR243C APA2P22108 325 aa4.43□□□□□ -1.7
PRP28YDR243C DBP2P24783 546 aaKnown RBP4.43□□□□□ -1.7
PRP28YDR243C SNT1P25357 1226 aa4.43□□□□□ -1.7
PRP28YDR243C HRR25P29295 494 aaKnown RBP4.43□□□□□ -1.7
PRP28YDR243C FUN30P31380 1131 aa4.43□□□□□ -1.7
PRP28YDR243C NAB2P32505 525 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
PRP28YDR243C DUG2P38149 878 aa4.43□□□□□ -1.7
PRP28YDR243C SUL1P38359 859 aa4.43□□□□□ -1.7
PRP28YDR243C PCA1P38360 1216 aa4.43□□□□□ -1.7
PRP28YDR243C HRB1P38922 454 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
PRP28YDR243C RAD55P38953 406 aa4.43□□□□□ -1.7
PRP28YDR243C YDR089WP38966 869 aa4.43□□□□□ -1.7
PRP28YDR243C PSY2P40164 858 aa4.43□□□□□ -1.7
PRP28YDR243C PSF2P40359 213 aa4.43□□□□□ -1.7
PRP28YDR243C GTO1P48239 356 aa4.43□□□□□ -1.7
PRP28YDR243C YNR068CP53754 272 aa4.43□□□□□ -1.7
PRP28YDR243C MRPL13Q02204 264 aa4.43□□□□□ -1.7
PRP28YDR243C RUB1Q03919 77 aa4.43□□□□□ -1.7
PRP28YDR243C RQC1Q05468 723 aaKnown RBP4.43□□□□□ -1.7
PRP28YDR243C COQ9Q05779 260 aa4.43□□□□□ -1.7
PRP28YDR243C YOR012WQ12351 137 aa4.43□□□□□ -1.7
PRP28YDR243C AVL9Q12500 764 aa4.43□□□□□ -1.7
PRP28YDR243C LEU2P04173 364 aaPredicted RBP4.42□□□□□ -1.7
PRP28YDR243C KIN28P06242 306 aa4.42□□□□□ -1.7
PRP28YDR243C MET3P08536 511 aa4.42□□□□□ -1.7
PRP28YDR243C MET8P15807 274 aa4.42□□□□□ -1.7
PRP28YDR243C PDC5P16467 563 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C CIN8P27895 1000 aa4.42□□□□□ -1.7
PRP28YDR243C SAC1P32368 623 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C PET309P32522 965 aaPredicted RBP4.42□□□□□ -1.7
PRP28YDR243C MNN1P39106 762 aa4.42□□□□□ -1.7
PRP28YDR243C SEO1P39709 593 aa4.42□□□□□ -1.7
PRP28YDR243C LIA1P47120 325 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C NNF1P47149 201 aa4.42□□□□□ -1.7
PRP28YDR243C CUL3P53202 744 aa4.42□□□□□ -1.7
PRP28YDR243C CPR6P53691 371 aaKnown RBP4.42□□□□□ -1.7
PRP28YDR243C RCF2P53721 224 aa4.42□□□□□ -1.7
PRP28YDR243C YNR040WP53736 256 aa4.42□□□□□ -1.7
PRP28YDR243C CWC24P53769 259 aa4.42□□□□□ -1.7
PRP28YDR243C UME1Q03010 460 aa4.42□□□□□ -1.7
PRP28YDR243C SRT1Q03175 343 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms