RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RBA50Q04418 439 aa2.89□□□□□ -1.95
SNU56YDR240C THI20Q08224 551 aa2.89□□□□□ -1.95
SNU56YDR240C LEU9Q12166 604 aaKnown RBP2.89□□□□□ -1.95
SNU56YDR240C MTF1P14908 341 aaKnown RBP2.88□□□□□ -1.95
SNU56YDR240C ADH7P25377 361 aa2.88□□□□□ -1.95
SNU56YDR240C ALY1P36117 915 aa2.88□□□□□ -1.95
SNU56YDR240C ANS1P38832 159 aa2.88□□□□□ -1.95
SNU56YDR240C ELO1P39540 310 aa2.88□□□□□ -1.95
SNU56YDR240C KAP123P40069 1113 aaKnown RBP2.88□□□□□ -1.95
SNU56YDR240C BUR6P40096 142 aa2.88□□□□□ -1.95
SNU56YDR240C YJL213WP40896 331 aa2.88□□□□□ -1.95
SNU56YDR240C RTT101P47050 842 aa2.88□□□□□ -1.95
SNU56YDR240C DIA3P52290 468 aa2.88□□□□□ -1.95
SNU56YDR240C BOR1P53838 576 aa2.88□□□□□ -1.95
SNU56YDR240C INN1P53901 409 aa2.88□□□□□ -1.95
SNU56YDR240C SAM50P53969 484 aa2.88□□□□□ -1.95
SNU56YDR240C SDH5Q08230 162 aa2.88□□□□□ -1.95
SNU56YDR240C GDH1P07262 454 aaKnown RBP2.87□□□□□ -1.95
SNU56YDR240C PWP1P21304 576 aaKnown RBP2.87□□□□□ -1.95
SNU56YDR240C NDC1P32500 655 aa2.87□□□□□ -1.95
SNU56YDR240C CBF2P32504 956 aa2.87□□□□□ -1.95
SNU56YDR240C ROT2P38138 954 aa2.87□□□□□ -1.95
SNU56YDR240C RPH1P39956 796 aa2.87□□□□□ -1.95
SNU56YDR240C YER010CP40011 234 aa2.87□□□□□ -1.95
SNU56YDR240C COS10P52924 374 aa2.87□□□□□ -1.95
SNU56YDR240C YGR021WP53212 290 aa2.87□□□□□ -1.95
SNU56YDR240C GTR1Q00582 310 aa2.87□□□□□ -1.95
SNU56YDR240C PDH1Q12428 516 aaKnown RBP2.87□□□□□ -1.95
SNU56YDR240C SEC62P21825 274 aa2.86□□□□□ -1.95
SNU56YDR240C VMA16P23968 213 aa2.86□□□□□ -1.95
SNU56YDR240C MRS6P32864 603 aaKnown RBP2.86□□□□□ -1.95
SNU56YDR240C SLC1P33333 303 aa2.86□□□□□ -1.95
SNU56YDR240C AGP2P38090 596 aa2.86□□□□□ -1.95
SNU56YDR240C KTR3P38130 404 aaPredicted RBP2.86□□□□□ -1.95
SNU56YDR240C CSM2P40465 213 aa2.86□□□□□ -1.95
SNU56YDR240C RPS10BP46784 105 aaKnown RBP2.86□□□□□ -1.95
SNU56YDR240C RHO4Q00246 291 aa2.86□□□□□ -1.95
SNU56YDR240C DIC1Q06143 298 aa2.86□□□□□ -1.95
SNU56YDR240C RPS10AQ08745 105 aaPredicted RBP2.86□□□□□ -1.95
SNU56YDR240C SET6Q12529 373 aa2.86□□□□□ -1.95
SNU56YDR240C YOL087CQ99247 1116 aa2.86□□□□□ -1.95
SNU56YDR240C BUD5P25300 642 aaPredicted RBP2.85□□□□□ -1.95
SNU56YDR240C SPC110P32380 944 aa2.85□□□□□ -1.95
SNU56YDR240C SIP2P34164 415 aaKnown RBP2.85□□□□□ -1.95
SNU56YDR240C MKT1P40850 830 aaKnown RBP2.85□□□□□ -1.95
SNU56YDR240C YPI1P43587 155 aa2.85□□□□□ -1.95
SNU56YDR240C RPS7BP48164 190 aaKnown RBP2.85□□□□□ -1.95
SNU56YDR240C YGL242CP53066 181 aa2.85□□□□□ -1.95
SNU56YDR240C ECM30Q06673 1274 aa2.85□□□□□ -1.95
SNU56YDR240C RTT109Q07794 436 aa2.85□□□□□ -1.95
SNU56YDR240C GRC3Q07845 632 aa2.85□□□□□ -1.95
SNU56YDR240C YLL056CQ12177 298 aa2.85□□□□□ -1.95
SNU56YDR240C RPS2P25443 254 aaKnown RBP2.84□□□□□ -1.95
SNU56YDR240C PTR2P32901 601 aa2.84□□□□□ -1.95
SNU56YDR240C YKL100CP34248 587 aa2.84□□□□□ -1.95
SNU56YDR240C IES5P40060 125 aa2.84□□□□□ -1.95
SNU56YDR240C FMP10P40098 244 aa2.84□□□□□ -1.95
SNU56YDR240C TPM2P40414 161 aa2.84□□□□□ -1.95
SNU56YDR240C RPR2P40571 144 aa2.84□□□□□ -1.95
SNU56YDR240C ALT2P52892 507 aa2.84□□□□□ -1.95
SNU56YDR240C YGR127WP53275 312 aa2.84□□□□□ -1.95
SNU56YDR240C RSM23Q01163 450 aa2.84□□□□□ -1.95
SNU56YDR240C VMS1Q04311 632 aaKnown RBP2.84□□□□□ -1.95
SNU56YDR240C RIX7Q07844 837 aaKnown RBP2.84□□□□□ -1.95
SNU56YDR240C TEN1Q07921 160 aa2.84□□□□□ -1.95
SNU56YDR240C REV1P12689 985 aa2.84□□□□□ -1.96
SNU56YDR240C MCK1P21965 375 aaKnown RBP2.84□□□□□ -1.96
SNU56YDR240C MTR2P34232 184 aaKnown RBP2.84□□□□□ -1.96
SNU56YDR240C YFR016CP43597 1233 aaKnown RBP2.84□□□□□ -1.96
SNU56YDR240C FAR3P46671 204 aa2.84□□□□□ -1.96
SNU56YDR240C ARC1P46672 376 aaKnown RBP2.84□□□□□ -1.96
SNU56YDR240C SMM1P53720 384 aaKnown RBP2.84□□□□□ -1.96
SNU56YDR240C YPL014WQ02606 381 aa2.84□□□□□ -1.96
SNU56YDR240C SNO4Q04902 237 aa2.84□□□□□ -1.96
SNU56YDR240C GLO2Q05584 274 aa2.84□□□□□ -1.96
SNU56YDR240C HSP33Q08914 237 aaKnown RBP2.84□□□□□ -1.96
SNU56YDR240C HSP32Q08992 237 aa2.84□□□□□ -1.96
SNU56YDR240C ATR1P13090 542 aa2.83□□□□□ -1.96
SNU56YDR240C AGA1P32323 725 aa2.83□□□□□ -1.96
SNU56YDR240C SAC6P32599 642 aaKnown RBP2.83□□□□□ -1.96
SNU56YDR240C YKL023WP36103 277 aaKnown RBP2.83□□□□□ -1.96
SNU56YDR240C AXL2P38928 823 aa2.83□□□□□ -1.96
SNU56YDR240C IDP2P41939 412 aa2.83□□□□□ -1.96
SNU56YDR240C SIP4P46954 829 aa2.83□□□□□ -1.96
SNU56YDR240C SHE10P53075 577 aa2.83□□□□□ -1.96
SNU56YDR240C EFM6P53970 246 aa2.83□□□□□ -1.96
SNU56YDR240C YMR087WQ04299 284 aa2.83□□□□□ -1.96
SNU56YDR240C TCO89Q08921 799 aa2.83□□□□□ -1.96
SNU56YDR240C CAR1P00812 333 aaKnown RBP2.82□□□□□ -1.96
SNU56YDR240C RPL20AP0CX23 172 aaKnown RBP2.82□□□□□ -1.96
SNU56YDR240C RPL20BP0CX24 172 aaPredicted RBP2.82□□□□□ -1.96
SNU56YDR240C PEP5P12868 1029 aa2.82□□□□□ -1.96
SNU56YDR240C NUP133P36161 1157 aa2.82□□□□□ -1.96
SNU56YDR240C TIF5P38431 405 aaKnown RBP2.82□□□□□ -1.96
SNU56YDR240C DED81P38707 554 aaKnown RBP2.82□□□□□ -1.96
SNU56YDR240C SPG5P42933 373 aa2.82□□□□□ -1.96
SNU56YDR240C ATG16Q03818 150 aa2.82□□□□□ -1.96
SNU56YDR240C DPB4Q04603 196 aaKnown RBP2.82□□□□□ -1.96
SNU56YDR240C APE1P14904 514 aa2.81□□□□□ -1.96
SNU56YDR240C AMD1P15274 810 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms