RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YNL019CP53975 284 aa12.17□□□□□ -0.46
PTP1YDL230W PRP38Q00723 242 aaPredicted RBP12.17□□□□□ -0.46
PTP1YDL230W GGA1Q06336 557 aa12.17□□□□□ -0.46
PTP1YDL230W STE6P12866 1290 aa12.16□□□□□ -0.46
PTP1YDL230W PMA2P19657 947 aa12.16□□□□□ -0.46
PTP1YDL230W RVS161P25343 265 aaKnown RBP12.16□□□□□ -0.46
PTP1YDL230W CIN8P27895 1000 aa12.16□□□□□ -0.46
PTP1YDL230W PEP12P32854 288 aa12.16□□□□□ -0.46
PTP1YDL230W UGP1P32861 499 aaKnown RBP12.16□□□□□ -0.46
PTP1YDL230W FRE2P36033 711 aa12.16□□□□□ -0.46
PTP1YDL230W RPL34BP40525 121 aaKnown RBP12.16□□□□□ -0.46
PTP1YDL230W IMA5P40884 581 aa12.16□□□□□ -0.46
PTP1YDL230W REF2P42073 533 aaPredicted RBP12.16□□□□□ -0.46
PTP1YDL230W MPS3P47069 682 aa12.16□□□□□ -0.46
PTP1YDL230W YPT32P51996 222 aaKnown RBP12.16□□□□□ -0.46
PTP1YDL230W DCP2P53550 970 aaKnown RBP12.16□□□□□ -0.46
PTP1YDL230W PEX13P80667 386 aa12.16□□□□□ -0.46
PTP1YDL230W SSL1Q04673 461 aaPredicted RBP12.16□□□□□ -0.46
PTP1YDL230W YPR114WQ06107 315 aa12.16□□□□□ -0.46
PTP1YDL230W IRC10Q08118 586 aa12.16□□□□□ -0.46
PTP1YDL230W STB6P36085 766 aa12.15□□□□□ -0.46
PTP1YDL230W BNA3P47039 444 aaKnown RBP12.15□□□□□ -0.46
PTP1YDL230W SHY1P53266 389 aa12.15□□□□□ -0.46
PTP1YDL230W FRE4P53746 719 aa12.15□□□□□ -0.46
PTP1YDL230W YMR111CQ04461 462 aaPredicted RBP12.15□□□□□ -0.46
PTP1YDL230W GMC2Q06201 188 aa12.15□□□□□ -0.46
PTP1YDL230W YLR413WQ06689 675 aa12.15□□□□□ -0.46
PTP1YDL230W YPR097WQ06839 1073 aa12.15□□□□□ -0.46
PTP1YDL230W YOR342CQ12182 319 aa12.15□□□□□ -0.46
PTP1YDL230W ARG81P05085 880 aa12.14□□□□□ -0.47
PTP1YDL230W MSS18P08593 268 aa12.14□□□□□ -0.47
PTP1YDL230W SNF4P12904 322 aa12.14□□□□□ -0.47
PTP1YDL230W ATR1P13090 542 aa12.14□□□□□ -0.47
PTP1YDL230W UGA1P17649 471 aa12.14□□□□□ -0.47
PTP1YDL230W FUN30P31380 1131 aa12.14□□□□□ -0.47
PTP1YDL230W RPT5P33297 434 aaKnown RBP12.14□□□□□ -0.47
PTP1YDL230W MRP8P35719 219 aa12.14□□□□□ -0.47
PTP1YDL230W CAF4P36130 643 aa12.14□□□□□ -0.47
PTP1YDL230W FAD1P38913 306 aa12.14□□□□□ -0.47
PTP1YDL230W VMA10P48836 114 aaKnown RBP12.14□□□□□ -0.47
PTP1YDL230W DIA3P52290 468 aa12.14□□□□□ -0.47
PTP1YDL230W YGL108CP53139 140 aa12.14□□□□□ -0.47
PTP1YDL230W ECM9Q02202 377 aa12.14□□□□□ -0.47
PTP1YDL230W YDL121CQ07541 149 aa12.14□□□□□ -0.47
PTP1YDL230W ULA1Q12059 462 aa12.14□□□□□ -0.47
PTP1YDL230W PSY3Q12318 242 aa12.14□□□□□ -0.47
PTP1YDL230W DBP10Q12389 995 aaKnown RBP12.14□□□□□ -0.47
PTP1YDL230W YKL018C-AQ3E7A7 99 aa12.14□□□□□ -0.47
PTP1YDL230W ARG3P05150 338 aa12.13□□□□□ -0.47
PTP1YDL230W SPT3P06844 337 aa12.13□□□□□ -0.47
PTP1YDL230W MSB1P21339 1137 aaKnown RBP12.13□□□□□ -0.47
PTP1YDL230W PHO87P25360 923 aa12.13□□□□□ -0.47
PTP1YDL230W RPS1AP33442 255 aaKnown RBP12.13□□□□□ -0.47
PTP1YDL230W ROT2P38138 954 aa12.13□□□□□ -0.47
PTP1YDL230W EXO1P39875 702 aa12.13□□□□□ -0.47
PTP1YDL230W IRR1P40541 1150 aa12.13□□□□□ -0.47
PTP1YDL230W SNL1P40548 159 aa12.13□□□□□ -0.47
PTP1YDL230W MPH1P40562 993 aa12.13□□□□□ -0.47
PTP1YDL230W IME4P41833 600 aa12.13□□□□□ -0.47
PTP1YDL230W GAT1P43574 510 aa12.13□□□□□ -0.47
PTP1YDL230W TOF2Q02208 771 aa12.13□□□□□ -0.47
PTP1YDL230W YPL014WQ02606 381 aa12.13□□□□□ -0.47
PTP1YDL230W HEH2Q03281 663 aa12.13□□□□□ -0.47
PTP1YDL230W UAF30Q08747 228 aa12.13□□□□□ -0.47
PTP1YDL230W JLP1Q12358 412 aa12.13□□□□□ -0.47
PTP1YDL230W HXK2P04807 486 aaKnown RBP12.12□□□□□ -0.47
PTP1YDL230W BCY1P07278 416 aaKnown RBP12.12□□□□□ -0.47
PTP1YDL230W MNE1P24720 663 aa12.12□□□□□ -0.47
PTP1YDL230W SPB1P25582 841 aaPredicted RBP12.12□□□□□ -0.47
PTP1YDL230W PEX34P25584 144 aa12.12□□□□□ -0.47
PTP1YDL230W URK1P27515 501 aa12.12□□□□□ -0.47
PTP1YDL230W MRPL17P36528 281 aa12.12□□□□□ -0.47
PTP1YDL230W TIM17P39515 158 aa12.12□□□□□ -0.47
PTP1YDL230W GCD10P41814 478 aa12.12□□□□□ -0.47
PTP1YDL230W AIM23P47015 356 aa12.12□□□□□ -0.47
PTP1YDL230W ORC3P54790 616 aa12.12□□□□□ -0.47
PTP1YDL230W SEG1Q04279 960 aa12.12□□□□□ -0.47
PTP1YDL230W PSR1Q07800 427 aa12.12□□□□□ -0.47
PTP1YDL230W PHO5P00635 467 aa12.11□□□□□ -0.47
PTP1YDL230W CDC21P06785 304 aa12.11□□□□□ -0.47
PTP1YDL230W DST1P07273 309 aa12.11□□□□□ -0.47
PTP1YDL230W MSS116P15424 664 aaKnown RBP12.11□□□□□ -0.47
PTP1YDL230W CDC3P32457 520 aaKnown RBP12.11□□□□□ -0.47
PTP1YDL230W COX13P32799 129 aa12.11□□□□□ -0.47
PTP1YDL230W LIP5P32875 414 aa12.11□□□□□ -0.47
PTP1YDL230W SDH3P33421 198 aa12.11□□□□□ -0.47
PTP1YDL230W SKG1P36169 355 aa12.11□□□□□ -0.47
PTP1YDL230W FAA2P39518 744 aa12.11□□□□□ -0.47
PTP1YDL230W NUP85P46673 744 aa12.11□□□□□ -0.47
PTP1YDL230W STB2P46679 850 aa12.11□□□□□ -0.47
PTP1YDL230W NAS6P50086 228 aa12.11□□□□□ -0.47
PTP1YDL230W MNT2P53059 558 aa12.11□□□□□ -0.47
PTP1YDL230W EMC4P53073 190 aa12.11□□□□□ -0.47
PTP1YDL230W SPO71Q03868 1245 aa12.11□□□□□ -0.47
PTP1YDL230W HBT1Q07653 1046 aaKnown RBP12.11□□□□□ -0.47
PTP1YDL230W FRT1Q99332 602 aa12.11□□□□□ -0.47
PTP1YDL230W PRP18P33411 251 aaPredicted RBP12.1□□□□□ -0.47
PTP1YDL230W YJR124CP47159 448 aa12.1□□□□□ -0.47
PTP1YDL230W MTR3P48240 250 aaPredicted RBP12.1□□□□□ -0.47
PTP1YDL230W UPF3P48412 387 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms