RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CLTAP09496 248 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 PDHBP11177 359 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 SLC7A5Q01650 507 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 TRIM68Q6AZZ1 485 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 NSUN7Q8NE18 718 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 NCOA7Q8NI08 942 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 MAST2Q6P0Q8 1798 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 CYP2D7A0A087X1C5 515 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 KLRG2A4D1S0 409 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 UPP2O95045 317 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 NLRP12P59046 1061 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 SUGP1Q8IWZ8 645 aaKnown RBP13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 FAM167BQ9BTA0 163 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 POLLQ9UGP5 575 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 TFR2Q9UP52 801 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 XDHP47989 1333 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 AKR1B15C9JRZ8 316 aaPredicted RBP13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 TCP11Q8WWU5 503 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 NAPBQ9H115 298 aa13.25□□□□□ -0.29
RBFOX1-224ENST00000641259 HSF2BPO75031 334 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 IRAK1P51617 712 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 RESTQ13127 1097 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 ALX1Q15699 326 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 MIEF2Q96C03 454 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 ZMYM6O95789 1325 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 MAGEB6P1A0A0J9YX57 407 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 MYO1BO43795 1136 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 SNX1Q13596 522 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 HLTFQ14527 1009 aaKnown RBP eCLIP13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 CCDC40Q4G0X9 1142 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 STAMQ92783 540 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 RGPD3A6NKT7 1758 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 RGPD4Q7Z3J3 1758 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 FAM170AA1A519 330 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 GOLGA6L10A6NI86 522 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 LGR5O75473 907 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 MMP10P09238 476 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 GUCY2FP51841 1108 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 SEC24CP53992 1094 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 SNCBQ16143 134 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 GNPTABQ3T906 1256 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 B4GALNT4Q76KP1 1039 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 TEX11Q8IYF3 940 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 FBXL16Q8N461 479 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 MYO6Q9UM54 1294 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 L1RE1Q9UN81 338 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 MAPK8IP1Q9UQF2 711 aa13.24□□□□□ -0.29
RBFOX1-224ENST00000641259 N4BP3O15049 544 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 FANCGO15287 622 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 PFKFB1P16118 471 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 USP5P45974 858 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 MYO1EQ12965 1108 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 PPP1R7Q15435 360 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 KCTD19Q17RG1 926 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 SPECC1LQ69YQ0 1117 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 NAA16Q6N069 864 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 RBM17Q96I25 401 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 VPS16Q9H269 839 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 AATFQ9NY61 560 aaKnown RBP eCLIP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 UFL1O94874 794 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 HOXA10P31260 410 aaPredicted RBP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 TRDNQ13061 729 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 GRAMD1CQ8IYS0 662 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 CCDC113Q9H0I3 377 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 CCDC88AQ3V6T2 1871 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 SEMA3EO15041 775 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 TRIM29Q14134 588 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 RALYLQ86SE5 291 aaKnown RBP13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 KSR1Q8IVT5 923 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 ZSWIM5Q9P217 1185 aa13.23□□□□□ -0.29
RBFOX1-224ENST00000641259 FDPSP14324 419 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 DYDC1Q8WWB3 177 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 ZKSCAN3Q9BRR0 538 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 LEMD3Q9Y2U8 911 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 RBM5P52756 815 aaKnown RBP eCLIP13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 KCNV1Q6PIU1 500 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 IGDCC4Q8TDY8 1250 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 ZNF274Q96GC6 653 aaPredicted RBP13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 SAMSN1Q9NSI8 373 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 PDS5AQ29RF7 1337 aaKnown RBP13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
RBFOX1-224ENST00000641259 SMIM23A6NLE4 172 aa13.21□□□□□ -0.29
RBFOX1-224ENST00000641259 SH2B2O14492 632 aaPredicted RBP13.21□□□□□ -0.29
RBFOX1-224ENST00000641259 SRGNP10124 158 aa13.21□□□□□ -0.29
RBFOX1-224ENST00000641259 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
RBFOX1-224ENST00000641259 TBC1D16Q8TBP0 767 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms