RNA–Protein interactions for RNA: ENST00000640939.1

GRAMD1B-217, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-217ENST00000640939 SNHG28P0DPA3 235 aa26.39■■□□□ 1.82
GRAMD1B-217ENST00000640939 TAL1P17542 331 aaPredicted RBP26.39■■□□□ 1.82
GRAMD1B-217ENST00000640939 STOX1Q6ZVD7 989 aa26.39■■□□□ 1.82
GRAMD1B-217ENST00000640939 CHST13Q8NET6 341 aa26.39■■□□□ 1.82
GRAMD1B-217ENST00000640939 DDX11Q96FC9 970 aa26.39■■□□□ 1.82
GRAMD1B-217ENST00000640939 ALAS1P13196 640 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 CYBAP13498 195 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 PRAMEF19Q5SWL8 479 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 LHX8Q68G74 356 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 ANKRD35Q8N283 1001 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 DIS3LQ8TF46 1054 aaKnown RBP26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 RANBP17Q9H2T7 1088 aaKnown RBP26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 RNF146Q9NTX7 359 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 FBXO40Q9UH90 709 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 OGDHLQ9ULD0 1010 aa26.38■■□□□ 1.81
GRAMD1B-217ENST00000640939 CENPBP07199 599 aaPredicted RBP26.37■■□□□ 1.81
GRAMD1B-217ENST00000640939 CAPN2P17655 700 aa26.37■■□□□ 1.81
GRAMD1B-217ENST00000640939 PAWRQ96IZ0 340 aaKnown RBP26.37■■□□□ 1.81
GRAMD1B-217ENST00000640939 TRERF1Q96PN7 1200 aa26.37■■□□□ 1.81
GRAMD1B-217ENST00000640939 ANO2Q9NQ90 1003 aa26.37■■□□□ 1.81
GRAMD1B-217ENST00000640939 DIS3Q9Y2L1 958 aaKnown RBP26.37■■□□□ 1.81
GRAMD1B-217ENST00000640939 IFIT1BQ5T764 474 aaKnown RBP26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 RALYLQ86SE5 291 aaKnown RBP26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 TINF2Q9BSI4 451 aa26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 CPVLQ9H3G5 476 aa26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 ACAD9Q9H845 621 aa26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 DDX20Q9UHI6 824 aaKnown RBP26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 CCPG1Q9ULG6 757 aa26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 FRMPD3Q5JV73 1810 aa26.36■■□□□ 1.81
GRAMD1B-217ENST00000640939 DNAJC25-GNG10A0A024R161 153 aa26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 SMCHD1A6NHR9 2005 aa26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 MNX1P50219 401 aaPredicted RBP26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 SEC23AQ15436 765 aa26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 TKFCQ3LXA3 575 aa26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 ANKLE1Q8NAG6 615 aa26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 NCOA7Q8NI08 942 aa26.35■■□□□ 1.81
GRAMD1B-217ENST00000640939 CDC45O75419 566 aa26.34■■□□□ 1.81
GRAMD1B-217ENST00000640939 ICAM1P05362 532 aa26.34■■□□□ 1.81
GRAMD1B-217ENST00000640939 MUM1L1Q5H9M0 696 aa26.34■■□□□ 1.81
GRAMD1B-217ENST00000640939 GPATCH4Q5T3I0 446 aaKnown RBP26.34■■□□□ 1.81
GRAMD1B-217ENST00000640939 CHST3Q7LGC8 479 aa26.34■■□□□ 1.81
GRAMD1B-217ENST00000640939 UBA5Q9GZZ9 404 aa26.34■■□□□ 1.81
GRAMD1B-217ENST00000640939 ANO1Q5XXA6 986 aa26.33■■□□□ 1.81
GRAMD1B-217ENST00000640939 NECAB2Q7Z6G3 386 aa26.33■■□□□ 1.81
GRAMD1B-217ENST00000640939 IFIT3O14879 490 aaKnown RBP26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 SLC27A2O14975 620 aa26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 PRPF38BQ5VTL8 546 aaKnown RBP26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 CASC1Q6TDU7 716 aa26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 DPF3Q92784 378 aa26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 SENP2Q9HC62 589 aa26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 A1CFQ9NQ94 594 aaKnown RBP26.32■■□□□ 1.8
GRAMD1B-217ENST00000640939 PARP1P09874 1014 aaKnown RBP26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 ANTXR2P58335 489 aa26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 CNTN2Q02246 1040 aa26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 CREB3L3Q68CJ9 461 aa26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 MB21D2Q8IYB1 491 aaPredicted RBP26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 FGD4Q96M96 766 aa26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 HTATIP2Q9BUP3 242 aa26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 PPP4R2Q9NY27 417 aa26.31■■□□□ 1.8
GRAMD1B-217ENST00000640939 POTEB2H3BUK9 544 aa26.3■■□□□ 1.8
GRAMD1B-217ENST00000640939 SEPT4O43236 478 aa26.3■■□□□ 1.8
GRAMD1B-217ENST00000640939 MSCO60682 206 aa26.3■■□□□ 1.8
GRAMD1B-217ENST00000640939 ASPRV1Q53RT3 343 aa26.3■■□□□ 1.8
GRAMD1B-217ENST00000640939 ERICH2A1L162 156 aa26.29■■□□□ 1.8
GRAMD1B-217ENST00000640939 NECTIN1Q15223 517 aa26.29■■□□□ 1.8
GRAMD1B-217ENST00000640939 NSMFQ6X4W1 530 aa26.29■■□□□ 1.8
GRAMD1B-217ENST00000640939 C11orf49Q9H6J7 331 aa26.29■■□□□ 1.8
GRAMD1B-217ENST00000640939 SNAI1O95863 264 aaPredicted RBP26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 WTAPQ15007 396 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 SART3Q15020 963 aaKnown RBP26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 TMEM67Q5HYA8 995 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 MAMDC4Q6UXC1 1216 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 ZNF467Q7Z7K2 595 aaPredicted RBP26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 ADGRF4Q8IZF3 695 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 STAG2Q8N3U4 1231 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 MSL3Q8N5Y2 521 aaKnown RBP26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 FAM133AQ8N9E0 248 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 NRBP1Q9UHY1 535 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 CNPY2Q9Y2B0 182 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 PFASO15067 1338 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 SYNGAP1Q96PV0 1343 aa26.28■■□□□ 1.8
GRAMD1B-217ENST00000640939 MCM3APO60318 1980 aa26.27■■□□□ 1.8
GRAMD1B-217ENST00000640939 NFIBO00712 420 aa26.27■■□□□ 1.8
GRAMD1B-217ENST00000640939 ZNF865P0CJ78 1059 aaPredicted RBP26.27■■□□□ 1.8
GRAMD1B-217ENST00000640939 COL9A3Q14050 684 aaPredicted RBP26.27■■□□□ 1.8
GRAMD1B-217ENST00000640939 VAT1LQ9HCJ6 419 aa26.27■■□□□ 1.8
GRAMD1B-217ENST00000640939 CYP39A1Q9NYL5 469 aa26.27■■□□□ 1.8
GRAMD1B-217ENST00000640939 SOWAHBA6NEL2 793 aa26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 DHX16O60231 1041 aaKnown RBP26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 CDC37Q16543 378 aaPredicted RBP26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 USH1GQ495M9 461 aa26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 IGDCC4Q8TDY8 1250 aa26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 PURBQ96QR8 312 aaKnown RBP26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 GPHNQ9NQX3 736 aaPredicted RBP26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 ZHX1Q9UKY1 873 aaPredicted RBP26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 ALPK3Q96L96 1907 aa26.26■■□□□ 1.79
GRAMD1B-217ENST00000640939 WDR19Q8NEZ3 1342 aa26.25■■□□□ 1.79
GRAMD1B-217ENST00000640939 PRC1O43663 620 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms