RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 RNF146Q9NTX7 359 aa17.39■□□□□ 0.37
TARDBP-231ENST00000639599 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
TARDBP-231ENST00000639599 DNAJC25-GNG10A0A024R161 153 aa17.38■□□□□ 0.37
TARDBP-231ENST00000639599 TLR3O15455 904 aaKnown RBP17.38■□□□□ 0.37
TARDBP-231ENST00000639599 ADAMTS4O75173 837 aa17.38■□□□□ 0.37
TARDBP-231ENST00000639599 SNAI1O95863 264 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-231ENST00000639599 MCCP23508 829 aa17.38■□□□□ 0.37
TARDBP-231ENST00000639599 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
TARDBP-231ENST00000639599 KCNA10Q16322 511 aa17.38■□□□□ 0.37
TARDBP-231ENST00000639599 C9orf50Q5SZB4 431 aa17.38■□□□□ 0.37
TARDBP-231ENST00000639599 OTUD7AQ8TE49 926 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-231ENST00000639599 RLFQ13129 1914 aa17.38■□□□□ 0.37
TARDBP-231ENST00000639599 RANBP2P49792 3224 aaKnown RBP17.38■□□□□ 0.37
TARDBP-231ENST00000639599 ASB14A6NK59 587 aa17.37■□□□□ 0.37
TARDBP-231ENST00000639599 ALAS1P13196 640 aa17.37■□□□□ 0.37
TARDBP-231ENST00000639599 CTDSPL2Q05D32 466 aa17.37■□□□□ 0.37
TARDBP-231ENST00000639599 CCDC144BQ3MJ40 725 aa17.37■□□□□ 0.37
TARDBP-231ENST00000639599 RRP12Q5JTH9 1297 aaKnown RBP17.37■□□□□ 0.37
TARDBP-231ENST00000639599 GNASQ5JWF2 1037 aa17.37■□□□□ 0.37
TARDBP-231ENST00000639599 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
TARDBP-231ENST00000639599 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
TARDBP-231ENST00000639599 KIAA0355O15063 1070 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 ZEB2O60315 1214 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 SMAD3P84022 425 aaKnown RBP17.36■□□□□ 0.37
TARDBP-231ENST00000639599 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.36■□□□□ 0.37
TARDBP-231ENST00000639599 CCDC144CPQ8IYA2 1237 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 TOX2Q96NM4 488 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 ELP1O95163 1332 aa17.36■□□□□ 0.37
TARDBP-231ENST00000639599 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 ASGR1P07306 291 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 CST5P28325 142 aaPredicted RBP17.35■□□□□ 0.37
TARDBP-231ENST00000639599 TNFAIP2Q03169 654 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 RCSD1Q6JBY9 416 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 ANKRD33Q7Z3H0 272 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 AGBL1Q96MI9 1066 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 AP5M1Q9H0R1 490 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 HELLSQ9NRZ9 838 aa17.35■□□□□ 0.37
TARDBP-231ENST00000639599 CNTN2Q02246 1040 aa17.34■□□□□ 0.37
TARDBP-231ENST00000639599 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.376e-7■□□□□ 8.8
TARDBP-231ENST00000639599 NSMFQ6X4W1 530 aa17.34■□□□□ 0.37
TARDBP-231ENST00000639599 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
TARDBP-231ENST00000639599 GUCD1Q96NT3 240 aa17.34■□□□□ 0.37
TARDBP-231ENST00000639599 A1CFQ9NQ94 594 aaKnown RBP17.34■□□□□ 0.37
TARDBP-231ENST00000639599 MYADML2A6NDP7 307 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 PLA2G6O60733 806 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 GJA9P57773 515 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 FAAP100Q0VG06 881 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 TMEM199Q8N511 208 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 CRBNQ96SW2 442 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 PRR12Q9ULL5 1215 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.33■□□□□ 0.36
TARDBP-231ENST00000639599 SZT2Q5T011 3432 aa17.33■□□□□ 0.36
TARDBP-231ENST00000639599 GREB1LQ9C091 1923 aaPredicted RBP17.33■□□□□ 0.36
TARDBP-231ENST00000639599 COL11A1P12107 1806 aaPredicted RBP17.33■□□□□ 0.36
TARDBP-231ENST00000639599 ARVCFO00192 962 aa17.32■□□□□ 0.36
TARDBP-231ENST00000639599 NMT2O60551 498 aa17.32■□□□□ 0.36
TARDBP-231ENST00000639599 TIMP1P01033 207 aa17.32■□□□□ 0.36
TARDBP-231ENST00000639599 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
TARDBP-231ENST00000639599 SNAP25P60880 206 aa17.32■□□□□ 0.36
TARDBP-231ENST00000639599 TLK2Q86UE8 772 aa17.32■□□□□ 0.36
TARDBP-231ENST00000639599 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
TARDBP-231ENST00000639599 RILPL2Q969X0 211 aa17.32■□□□□ 0.36
TARDBP-231ENST00000639599 MPHOSPH6Q99547 160 aaKnown RBP17.32■□□□□ 0.36
TARDBP-231ENST00000639599 CDX2Q99626 313 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-231ENST00000639599 UPF3AQ9H1J1 476 aaKnown RBP17.32■□□□□ 0.36
TARDBP-231ENST00000639599 PARP14Q460N5 1801 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 ORC4O43929 436 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 CABYRO75952 493 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 FOSL2P15408 326 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 ITGB8P26012 769 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 PDE1AP54750 535 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 FAM133AQ8N9E0 248 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 MTIF3Q9H2K0 278 aaKnown RBP17.31■□□□□ 0.36
TARDBP-231ENST00000639599 SEMA6BQ9H3T3 888 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 ADD3Q9UEY8 706 aaKnown RBP17.31■□□□□ 0.36
TARDBP-231ENST00000639599 ANAPC4Q9UJX5 808 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 PNMA2Q9UL42 364 aa17.31■□□□□ 0.36
TARDBP-231ENST00000639599 TMEM265A0A087WTH1 108 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-231ENST00000639599 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-231ENST00000639599 PTPDC1A2A3K4 754 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 ICAM1P05362 532 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 TOP1P11387 765 aaKnown RBP17.3■□□□□ 0.36
TARDBP-231ENST00000639599 BEX3Q00994 111 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 SYDE2Q5VT97 1194 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 CCSAPQ6IQ19 270 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-231ENST00000639599 MFSD5Q6N075 450 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 EEPD1Q7L9B9 569 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 MAFAQ8NHW3 353 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-231ENST00000639599 FGD4Q96M96 766 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 PPP1R12CQ9BZL4 782 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-231ENST00000639599 INCENPQ9NQS7 918 aa17.3■□□□□ 0.36
TARDBP-231ENST00000639599 IL17RBQ9NRM6 502 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms