RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
LINC02001-202ENST00000638682 MAD2L2Q9UI95 211 aa12.91□□□□□ -0.34
LINC02001-202ENST00000638682 HERC5Q9UII4 1024 aaKnown RBP12.91□□□□□ -0.34
LINC02001-202ENST00000638682 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
LINC02001-202ENST00000638682 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 PALM3A6NDB9 673 aaPredicted RBP12.9□□□□□ -0.34
LINC02001-202ENST00000638682 EVI5O60447 810 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.34
LINC02001-202ENST00000638682 PKN1Q16512 942 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 LRRC47Q8N1G4 583 aaKnown RBP12.9□□□□□ -0.34
LINC02001-202ENST00000638682 STAG2Q8N3U4 1231 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 HOOK2Q96ED9 719 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 ZNF396Q96N95 335 aaPredicted RBP12.9□□□□□ -0.34
LINC02001-202ENST00000638682 SCAND2PQ9GZW5 306 aaPredicted RBP12.9□□□□□ -0.34
LINC02001-202ENST00000638682 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC02001-202ENST00000638682 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
LINC02001-202ENST00000638682 KIF28PB7ZC32 967 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 GDF11O95390 407 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 MBD3O95983 291 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
LINC02001-202ENST00000638682 MAP2K2P36507 400 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 ABCB5Q2M3G0 1257 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 SHROOM1Q2M3G4 852 aaPredicted RBP12.89□□□□□ -0.35
LINC02001-202ENST00000638682 TMEM179Q6ZVK1 233 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 RASGRP2Q7LDG7 609 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 BRAPQ7Z569 592 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 GPT2Q8TD30 523 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 WNT2BQ93097 391 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 ZDHHC16Q969W1 377 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 LZTS2Q9BRK4 669 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
LINC02001-202ENST00000638682 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
LINC02001-202ENST00000638682 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 FAM155AB1AL88 458 aaPredicted RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 KLRF2D3W0D1 207 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 MMP1P03956 469 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 XBP1P17861 261 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 MAP2K1Q02750 393 aaPredicted RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 SEPT2Q15019 361 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 PIBF1Q8WXW3 757 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 SPATA32Q96LK8 384 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 BEGAINQ9BUH8 593 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 KCNJ14Q9UNX9 436 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 ELP1O95163 1332 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 PDHBP11177 359 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 SCG2P13521 617 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 UBE2HP62256 183 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 RRP1BQ14684 758 aaKnown RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 PFKFB3Q16875 520 aaPredicted RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
LINC02001-202ENST00000638682 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 SPZ1Q9BXG8 430 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 CABP5Q9NP86 173 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 VPS54Q9P1Q0 977 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 NYAP2Q9P242 653 aa12.88□□□□□ -0.35
LINC02001-202ENST00000638682 GH2P01242 217 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 SNHG28P0DPA3 235 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
LINC02001-202ENST00000638682 U2AF2P26368 475 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC02001-202ENST00000638682 CEBPZQ03701 1054 aaKnown RBP12.87□□□□□ -0.35
LINC02001-202ENST00000638682 ICA1Q05084 483 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 MYSM1Q5VVJ2 828 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
LINC02001-202ENST00000638682 ANKRD13AQ8IZ07 590 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 SHISA4Q96DD7 197 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 CLMNQ96JQ2 1002 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 WRNIP1Q96S55 665 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 CSADQ9Y600 493 aa12.87□□□□□ -0.35
LINC02001-202ENST00000638682 FRMPD2Q68DX3 1309 aaPredicted RBP12.86□□□□□ -0.35
LINC02001-202ENST00000638682 CYTH3O43739 400 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
LINC02001-202ENST00000638682 SMARCA1P28370 1054 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 JAG1P78504 1218 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
LINC02001-202ENST00000638682 MKL1Q969V6 931 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 ZIC5Q96T25 663 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 PHF20Q9BVI0 1012 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 FTOQ9C0B1 505 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC02001-202ENST00000638682 FOXP1Q9H334 677 aaPredicted RBP12.86□□□□□ -0.35
LINC02001-202ENST00000638682 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
LINC02001-202ENST00000638682 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms