RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 ARFGEF1Q9Y6D6 1849 aa11.93□□□□□ -0.5
PAX6-235ENST00000638629 BAZ2BQ9UIF8 2168 aaKnown RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 SCG2P13521 617 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 MMP14P50281 582 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 SLC35G1Q2M3R5 365 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 RASGRP2Q7LDG7 609 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 PHF20Q9BVI0 1012 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
PAX6-235ENST00000638629 USP17L5A8MUK1 530 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 WNT10BO00744 389 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 SLFN14P0C7P3 912 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 ZNF280AP59817 542 aaPredicted RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 NBPF9Q3BBW0 867 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 SHC4Q6S5L8 630 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 NOSTRINQ8IVI9 506 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 CNTNAP1P78357 1384 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 CYTH3O43739 400 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
PAX6-235ENST00000638629 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 ARHGAP27Q6ZUM4 889 aa11.92□□□□□ -0.5
PAX6-235ENST00000638629 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 PDHBP11177 359 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 GMPSP49915 693 aaPredicted RBP11.91□□□□□ -0.5
PAX6-235ENST00000638629 SHROOM1Q2M3G4 852 aaPredicted RBP11.91□□□□□ -0.5
PAX6-235ENST00000638629 RBM26Q5T8P6 1007 aaKnown RBP11.91□□□□□ -0.5
PAX6-235ENST00000638629 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
PAX6-235ENST00000638629 GREB1LQ9C091 1923 aaPredicted RBP11.91□□□□□ -0.5
PAX6-235ENST00000638629 TPM1P09493 284 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 UBASH3AP57075 661 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 NR5A1Q13285 461 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
PAX6-235ENST00000638629 TERF2Q15554 542 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 SYT10Q6XYQ8 523 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 FAM83AQ86UY5 434 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 DPF2Q92785 391 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 KANSL2Q9H9L4 492 aa11.91□□□□□ -0.5
PAX6-235ENST00000638629 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
PAX6-235ENST00000638629 BIN1O00499 593 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 ZSCAN12O43309 604 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 GDF11O95390 407 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 SNHG28P0DPA3 235 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 KRT2P35908 639 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 NT5DC1Q5TFE4 455 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 KRBA2Q6ZNG9 492 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 CPVLQ9H3G5 476 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 CNOT7Q9UIV1 285 aaKnown RBP11.9□□□□□ -0.5
PAX6-235ENST00000638629 HOOK1Q9UJC3 728 aaKnown RBP11.9□□□□□ -0.5
PAX6-235ENST00000638629 ARHGAP6O43182 974 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 EEF2P13639 858 aaKnown RBP11.9□□□□□ -0.5
PAX6-235ENST00000638629 LMOD1P29536 600 aaPredicted RBP11.9□□□□□ -0.5
PAX6-235ENST00000638629 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
PAX6-235ENST00000638629 SEPT2Q15019 361 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 TRIM65Q6PJ69 517 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 TMEM179Q6ZVK1 233 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 MICALL2Q8IY33 904 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 MKL1Q969V6 931 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 TMEM39BQ9GZU3 492 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
PAX6-235ENST00000638629 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.51
PAX6-235ENST00000638629 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
PAX6-235ENST00000638629 ATP8B1O43520 1251 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 NLRP5P59047 1200 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 TBX2Q13207 712 aaPredicted RBP11.89□□□□□ -0.51
PAX6-235ENST00000638629 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 UBA5Q9GZZ9 404 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 BRMS1Q9HCU9 246 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 CABP5Q9NP86 173 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 GOLGB1Q14789 3259 aaKnown RBP11.89□□□□□ -0.51
PAX6-235ENST00000638629 ZNF541Q9H0D2 1346 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 EGFRP00533 1210 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
PAX6-235ENST00000638629 JAG1P78504 1218 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 NPY5RQ15761 445 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 CT47A1Q5JQC4 288 aaPredicted RBP11.89□□□□□ -0.51
PAX6-235ENST00000638629 SIAH1Q8IUQ4 282 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 TRIML1Q8N9V2 468 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 GPKOWQ92917 476 aaPredicted RBP eCLIP11.89□□□□□ -0.51
PAX6-235ENST00000638629 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
PAX6-235ENST00000638629 SERPINC1P01008 464 aa11.88□□□□□ -0.51
PAX6-235ENST00000638629 GH2P01242 217 aa11.88□□□□□ -0.51
PAX6-235ENST00000638629 ATP1A3P13637 1013 aa11.88□□□□□ -0.51
PAX6-235ENST00000638629 TOB1P50616 345 aaPredicted RBP11.88□□□□□ -0.51
PAX6-235ENST00000638629 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
PAX6-235ENST00000638629 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms