RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 MS4A4AQ96JQ5 239 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 GLT8D2Q9H1C3 349 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 VPS54Q9P1Q0 977 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 AGTPBP1Q9UPW5 1226 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 SLC45A1Q9Y2W3 748 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 MYH8P13535 1937 aa15.42■□□□□ 0.06
LINC00643-207ENST00000637212 ESYT2A0FGR8 921 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 F13A1P00488 732 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 OSBPP22059 807 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC00643-207ENST00000637212 GNA11P29992 359 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
LINC00643-207ENST00000637212 OAZ1P54368 228 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 DGKZQ13574 1117 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 OTUD7BQ6GQQ9 843 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 GADL1Q6ZQY3 521 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 ZMYND12Q9H0C1 365 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 FOXP1Q9H334 677 aaPredicted RBP15.41■□□□□ 0.06
LINC00643-207ENST00000637212 SLC38A10Q9HBR0 1119 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 BRMS1Q9HCU9 246 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 FBXO28Q9NVF7 368 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 DOCK1Q14185 1865 aa15.41■□□□□ 0.06
LINC00643-207ENST00000637212 TESPA1A2RU30 521 aaPredicted RBP15.4■□□□□ 0.06
LINC00643-207ENST00000637212 VWA5AO00534 786 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 PPP1R11O60927 126 aaPredicted RBP15.4■□□□□ 0.06
LINC00643-207ENST00000637212 MRPL12P52815 198 aaKnown RBP15.4■□□□□ 0.06
LINC00643-207ENST00000637212 INHBEP58166 350 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 GUCY1B3Q02153 619 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 BRAPQ7Z569 592 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 MB21D1Q8N884 522 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 DAGLBQ8NCG7 672 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 BICD2Q8TD16 824 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 GPKOWQ92917 476 aaPredicted RBP eCLIP15.4■□□□□ 0.06
LINC00643-207ENST00000637212 GJB4Q9NTQ9 266 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 PCDHA4Q9UN74 947 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 KCNJ14Q9UNX9 436 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 CTDP1Q9Y5B0 961 aaPredicted RBP15.4■□□□□ 0.06
LINC00643-207ENST00000637212 PCDHA1Q9Y5I3 950 aa15.4■□□□□ 0.06
LINC00643-207ENST00000637212 SMCO2A6NFE2 343 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 ICAM1P05362 532 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 KRT2P35908 639 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 NAPAP54920 295 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 KIF23Q02241 960 aaPredicted RBP15.39■□□□□ 0.05
LINC00643-207ENST00000637212 RESTQ13127 1097 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 TREML2Q5T2D2 321 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 MCTP1Q6DN14 999 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 LBX2Q6XYB7 198 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 ANKRD23Q86SG2 305 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 RASAL3Q86YV0 1011 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
LINC00643-207ENST00000637212 COA7Q96BR5 231 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 SHISA4Q96DD7 197 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 MAF1Q9H063 256 aa15.39■□□□□ 0.05
LINC00643-207ENST00000637212 MANSC4A6NHS7 340 aaPredicted RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 FOSBP53539 338 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 SNAP25P60880 206 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 IRX3P78415 501 aaPredicted RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 ATL3Q6DD88 541 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 TYW1BQ6NUM6 668 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 BLIDQ8IZY5 108 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 SAMD3Q8N6K7 520 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 GTF3C2Q8WUA4 911 aaPredicted RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 P2RX7Q99572 595 aaKnown RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 PSTPIP2Q9H939 334 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 RIC8AQ9NPQ8 531 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 PNMA3Q9UL41 463 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 ABT1Q9ULW3 272 aaKnown RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 MRPL11Q9Y3B7 192 aaKnown RBP15.38■□□□□ 0.05
LINC00643-207ENST00000637212 ABCB11O95342 1321 aa15.38■□□□□ 0.05
LINC00643-207ENST00000637212 CCL15-CCL14A0A0B4J2E2 113 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 BTBD18B2RXH4 712 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 SLC10A3P09131 477 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 ADCY7P51828 1080 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
LINC00643-207ENST00000637212 NPY5RQ15761 445 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 CCL15Q16663 113 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 TKFCQ3LXA3 575 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
LINC00643-207ENST00000637212 CCDC174Q6PII3 467 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 REPS2Q8NFH8 660 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
LINC00643-207ENST00000637212 BRI3BPQ8WY22 251 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 ATG4CQ96DT6 458 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 ASCC2Q9H1I8 757 aaPredicted RBP15.37■□□□□ 0.05
LINC00643-207ENST00000637212 ZCCHC17Q9NP64 241 aaKnown RBP15.37■□□□□ 0.05
LINC00643-207ENST00000637212 ZNF536O15090 1300 aa15.37■□□□□ 0.05
LINC00643-207ENST00000637212 SPDYE16A6NNV3 312 aaPredicted RBP15.36■□□□□ 0.05
LINC00643-207ENST00000637212 M0R2N6 131 aa15.36■□□□□ 0.05
LINC00643-207ENST00000637212 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
LINC00643-207ENST00000637212 FERMT3Q86UX7 667 aa15.36■□□□□ 0.05
LINC00643-207ENST00000637212 NOSTRINQ8IVI9 506 aa15.36■□□□□ 0.05
LINC00643-207ENST00000637212 CUL5Q93034 780 aa15.36■□□□□ 0.05
LINC00643-207ENST00000637212 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
LINC00643-207ENST00000637212 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms