RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 GPATCH4Q5T3I0 446 aaKnown RBP18.39■□□□□ 0.53
LINC00339-207ENST00000634712 BTNL9Q6UXG8 535 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 MAML3Q96JK9 1138 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 CRISPLD2Q9H0B8 497 aa18.39■□□□□ 0.53
LINC00339-207ENST00000634712 DIS3Q9Y2L1 958 aaKnown RBP18.39■□□□□ 0.53
LINC00339-207ENST00000634712 CYB5R4Q7L1T6 521 aa18.38■□□□□ 0.53
LINC00339-207ENST00000634712 TRERF1Q96PN7 1200 aa18.38■□□□□ 0.53
LINC00339-207ENST00000634712 LSG1Q9H089 658 aaKnown RBP18.38■□□□□ 0.53
LINC00339-207ENST00000634712 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
LINC00339-207ENST00000634712 CCPG1Q9ULG6 757 aa18.38■□□□□ 0.53
LINC00339-207ENST00000634712 ZNF236Q9UL36 1845 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 IFIT3O14879 490 aaKnown RBP18.37■□□□□ 0.53
LINC00339-207ENST00000634712 GOLGA8HP0CJ92 632 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 SNHG28P0DPA3 235 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 ZNF792Q3KQV3 632 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 RANBP17Q9H2T7 1088 aaKnown RBP18.37■□□□□ 0.53
LINC00339-207ENST00000634712 RNF146Q9NTX7 359 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 PNMA2Q9UL42 364 aa18.37■□□□□ 0.53
LINC00339-207ENST00000634712 TNRC18O15417 2968 aaPredicted RBP18.36■□□□□ 0.53
LINC00339-207ENST00000634712 ZNF536O15090 1300 aa18.36■□□□□ 0.53
LINC00339-207ENST00000634712 MSCO60682 206 aa18.36■□□□□ 0.53
LINC00339-207ENST00000634712 ICAM1P05362 532 aa18.36■□□□□ 0.53
LINC00339-207ENST00000634712 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
LINC00339-207ENST00000634712 TINF2Q9BSI4 451 aa18.36■□□□□ 0.53
LINC00339-207ENST00000634712 HTATIP2Q9BUP3 242 aa18.36■□□□□ 0.53
LINC00339-207ENST00000634712 PDE4DIPQ5VU43 2346 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 ASPRV1Q53RT3 343 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC00339-207ENST00000634712 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 DPF3Q92784 378 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 UBA5Q9GZZ9 404 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
LINC00339-207ENST00000634712 OGDHLQ9ULD0 1010 aa18.35■□□□□ 0.53
LINC00339-207ENST00000634712 MKI67P46013 3256 aaKnown RBP18.34■□□□□ 0.53
LINC00339-207ENST00000634712 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 SLC27A2O14975 620 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 DHX16O60231 1041 aaKnown RBP18.34■□□□□ 0.53
LINC00339-207ENST00000634712 CYBAP13498 195 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 WTAPQ15007 396 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 SEC23AQ15436 765 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 PRAMEF19Q5SWL8 479 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 CHST3Q7LGC8 479 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
LINC00339-207ENST00000634712 PAWRQ96IZ0 340 aaKnown RBP18.34■□□□□ 0.53
LINC00339-207ENST00000634712 CNPY2Q9Y2B0 182 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 TAF6LQ9Y6J9 622 aa18.34■□□□□ 0.53
LINC00339-207ENST00000634712 DNAJC25-GNG10A0A024R161 153 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 IGHA2P01877 340 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 TMEM67Q5HYA8 995 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 CREB3L3Q68CJ9 461 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 LHX8Q68G74 356 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 STOX1Q6ZVD7 989 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 TRPV1Q8NER1 839 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 NRBP1Q9UHY1 535 aa18.33■□□□□ 0.53
LINC00339-207ENST00000634712 PFASO15067 1338 aa18.33■□□□□ 0.52
LINC00339-207ENST00000634712 SEPT4O43236 478 aa18.32■□□□□ 0.52
LINC00339-207ENST00000634712 NECTIN1Q15223 517 aa18.32■□□□□ 0.52
LINC00339-207ENST00000634712 NSMFQ6X4W1 530 aa18.32■□□□□ 0.52
LINC00339-207ENST00000634712 UBE2Q1Q7Z7E8 422 aa18.32■□□□□ 0.52
LINC00339-207ENST00000634712 ZNF467Q7Z7K2 595 aaPredicted RBP18.32■□□□□ 0.52
LINC00339-207ENST00000634712 VAT1LQ9HCJ6 419 aa18.32■□□□□ 0.52
LINC00339-207ENST00000634712 A1CFQ9NQ94 594 aaKnown RBP18.32■□□□□ 0.52
LINC00339-207ENST00000634712 MCM5P33992 734 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 PRPF38BQ5VTL8 546 aaKnown RBP18.31■□□□□ 0.52
LINC00339-207ENST00000634712 CATIPQ7Z7H3 387 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
LINC00339-207ENST00000634712 ADGRF4Q8IZF3 695 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 CPVLQ9H3G5 476 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 PLXNA1Q9UIW2 1896 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 SYNGAP1Q96PV0 1343 aa18.31■□□□□ 0.52
LINC00339-207ENST00000634712 ANO1Q5XXA6 986 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 MAMDC4Q6UXC1 1216 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 DIS3LQ8TF46 1054 aaKnown RBP18.3■□□□□ 0.52
LINC00339-207ENST00000634712 C11orf49Q9H6J7 331 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 PRC1O43663 620 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
LINC00339-207ENST00000634712 CNTN2Q02246 1040 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
LINC00339-207ENST00000634712 USH1GQ495M9 461 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 NFXL1Q6ZNB6 911 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 ARRDC4Q8NCT1 418 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 IGDCC4Q8TDY8 1250 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 CYP39A1Q9NYL5 469 aa18.3■□□□□ 0.52
LINC00339-207ENST00000634712 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
LINC00339-207ENST00000634712 WDR19Q8NEZ3 1342 aa18.29■□□□□ 0.52
LINC00339-207ENST00000634712 ASB14A6NK59 587 aa18.29■□□□□ 0.52
LINC00339-207ENST00000634712 RARBP10826 455 aa18.29■□□□□ 0.52
LINC00339-207ENST00000634712 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
LINC00339-207ENST00000634712 ANTXR2P58335 489 aa18.29■□□□□ 0.52
LINC00339-207ENST00000634712 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
LINC00339-207ENST00000634712 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
LINC00339-207ENST00000634712 TMEM87BQ96K49 555 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms