RNA–Protein interactions for RNA: ENST00000633109.1

LINC01002-221, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-221ENST00000633109 MYH13Q9UKX3 1938 aa4.52□□□□□ -1.69
LINC01002-221ENST00000633109 ROBO3Q96MS0 1386 aa4.52□□□□□ -1.69
LINC01002-221ENST00000633109 USP34Q70CQ2 3546 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 FRMPD3Q5JV73 1810 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 MROH7-TTC4A0A0A0MT08 1334 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 PTPRCP08575 1304 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 MUC6Q6W4X9 2439 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 DDTLA6NHG4 134 aaPredicted RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 EYA2O00167 538 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 COBLO75128 1261 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 SLC5A1P13866 664 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 ZKSCAN1P17029 563 aaPredicted RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 RHOQP17081 205 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 SYN1P17600 705 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 ITGB7P26010 798 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 RFC5P40937 340 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 RHBDL3P58872 404 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 SMAD3P84022 425 aaKnown RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 EXOSC9Q06265 439 aaKnown RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 DDX10Q13206 875 aaKnown RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 RASGRF1Q13972 1273 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 SNX17Q15036 470 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 LRRC26Q2I0M4 334 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 GADL1Q6ZQY3 521 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 ATG9AQ7Z3C6 839 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 PRICKLE2Q7Z3G6 844 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 METTL16Q86W50 562 aaKnown RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 ZNF384Q8TF68 577 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 GTF3C2Q8WUA4 911 aaPredicted RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 APBA2Q99767 749 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 OCSTAMPQ9BR26 566 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 WDR18Q9BV38 432 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 GINM1Q9NU53 330 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 USP40Q9NVE5 1235 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 HERC5Q9UII4 1024 aaKnown RBP4.51□□□□□ -1.69
LINC01002-221ENST00000633109 DENND2AQ9ULE3 1009 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 TRIOO75962 3097 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 SIPA1L1O43166 1804 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 WDR87Q6ZQQ6 2873 aa4.51□□□□□ -1.69
LINC01002-221ENST00000633109 ZNF521Q96K83 1311 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 A0A0G2JMZ2 1700 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 GPR75-ASB3A0A0A6YYF3 556 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 DNM1LO00429 736 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 MSCO60682 206 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 HOXC6P09630 235 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 MAPK4P31152 587 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 CAP2P40123 477 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 HMGCS2P54868 508 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 BACE1P56817 501 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 HERVK_113P62684 666 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 CACNB2Q08289 660 aaPredicted RBP4.5□□□□□ -1.69
LINC01002-221ENST00000633109 ATP2B3Q16720 1220 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 C1orf53Q5VUE5 145 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 FOXD4L5Q5VV16 416 aaPredicted RBP4.5□□□□□ -1.69
LINC01002-221ENST00000633109 CD163Q86VB7 1156 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 MAFAQ8NHW3 353 aaPredicted RBP4.5□□□□□ -1.69
LINC01002-221ENST00000633109 KLHDC4Q8TBB5 520 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 C12orf42Q96LP6 360 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 CDX2Q99626 313 aaPredicted RBP4.5□□□□□ -1.69
LINC01002-221ENST00000633109 USP44Q9H0E7 712 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 TXNRD2Q9NNW7 524 aa4.5□□□□□ -1.69
LINC01002-221ENST00000633109 GNL3LQ9NVN8 582 aaKnown RBP4.5□□□□□ -1.69
LINC01002-221ENST00000633109 LRRFIP2Q9Y608 721 aaKnown RBP4.5□□□□□ -1.69
LINC01002-221ENST00000633109 MYO15AQ9UKN7 3530 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 USP17L5A8MUK1 530 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 SHISA8B8ZZ34 492 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 IGSF3O75054 1194 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 ASNSP08243 561 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 ZEB1P37275 1124 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 IL15P40933 162 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 RGS2P41220 211 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 BTDP43251 543 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 CHRNA4P43681 627 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 PHKA1P46020 1223 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 MAP2K3P46734 347 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 ERVK-9P63128 1117 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 ERVK-24P63145 666 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 IRX3P78415 501 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 PTK2Q05397 1052 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 SPP2Q13103 211 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 PDE3AQ14432 1141 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 GRB14Q14449 540 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 RRP1BQ14684 758 aaKnown RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 CCDC102BQ68D86 513 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 SLC4A10Q6U841 1118 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 LBX2Q6XYB7 198 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 GPR142Q7Z601 462 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 CCDC84Q86UT8 332 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 DZIP1Q86YF9 867 aaKnown RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 GPRC5AQ8NFJ5 357 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 LPAR1Q92633 364 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 KCTD15Q96SI1 283 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 GAS2L1Q99501 681 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 TTYH1Q9H313 450 aaPredicted RBP4.49□□□□□ -1.69
LINC01002-221ENST00000633109 SUV39H2Q9H5I1 410 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 DNAJC18Q9H819 358 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 ATAD5Q96QE3 1844 aa4.49□□□□□ -1.69
LINC01002-221ENST00000633109 CFAP54Q96N23 3096 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms