RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 NOL8Q76FK4 1167 aaKnown RBP13.23□□□□□ -0.29
CCDC163-208ENST00000629670 KLHDC9Q8NEP7 349 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 ZNFX1Q9P2E3 1918 aaKnown RBP13.23□□□□□ -0.29
CCDC163-208ENST00000629670 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
CCDC163-208ENST00000629670 PARP14Q460N5 1801 aa13.23□□□□□ -0.29
CCDC163-208ENST00000629670 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 ELP1O95163 1332 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 ASB14A6NK59 587 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 RANBP6O60518 1105 aaKnown RBP13.22□□□□□ -0.29
CCDC163-208ENST00000629670 PLA2G6O60733 806 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 MCCP23508 829 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 CCDC144BQ3MJ40 725 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 ARMCX2Q7L311 632 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 ANKRD33Q7Z3H0 272 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
CCDC163-208ENST00000629670 EVI5LQ96CN4 794 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
CCDC163-208ENST00000629670 RNF146Q9NTX7 359 aa13.22□□□□□ -0.29
CCDC163-208ENST00000629670 GREB1LQ9C091 1923 aaPredicted RBP13.21□□□□□ -0.29
CCDC163-208ENST00000629670 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
CCDC163-208ENST00000629670 ALAS1P13196 640 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 CST5P28325 142 aaPredicted RBP13.21□□□□□ -0.29
CCDC163-208ENST00000629670 GJA9P57773 515 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
CCDC163-208ENST00000629670 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 HELLSQ9NRZ9 838 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 TOMM22Q9NS69 142 aa13.21□□□□□ -0.29
CCDC163-208ENST00000629670 A0A0U1RQG5 324 aaPredicted RBP13.2□□□□□ -0.3
CCDC163-208ENST00000629670 ZEB2O60315 1214 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 TIMP1P01033 207 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 ASGR1P07306 291 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 TNFAIP2Q03169 654 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 CTDSPL2Q05D32 466 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 FAAP100Q0VG06 881 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 KCTD1Q719H9 257 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 AGBL1Q96MI9 1066 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 UPF3AQ9H1J1 476 aaKnown RBP13.2□□□□□ -0.3
CCDC163-208ENST00000629670 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 MTMR7Q9Y216 660 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC163-208ENST00000629670 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 SMCHD1A6NHR9 2005 aa13.2□□□□□ -0.3
CCDC163-208ENST00000629670 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 ARVCFO00192 962 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 CABYRO75952 493 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 CNTN2Q02246 1040 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 TMEM199Q8N511 208 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 A1CFQ9NQ94 594 aaKnown RBP13.19□□□□□ -0.3
CCDC163-208ENST00000629670 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
CCDC163-208ENST00000629670 COL6A3P12111 3177 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 ORC4O43929 436 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 ITGB8P26012 769 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 ALX1Q15699 326 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
CCDC163-208ENST00000629670 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC163-208ENST00000629670 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 ADD3Q9UEY8 706 aaKnown RBP13.18□□□□□ -0.3
CCDC163-208ENST00000629670 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
CCDC163-208ENST00000629670 ZNF536O15090 1300 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 MYADML2A6NDP7 307 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 NMT2O60551 498 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 ICAM1P05362 532 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 TOP1P11387 765 aaKnown RBP13.17□□□□□ -0.3
CCDC163-208ENST00000629670 CDK7P50613 346 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 PDE1AP54750 535 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
CCDC163-208ENST00000629670 IQSEC1Q6DN90 963 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 FGD4Q96M96 766 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 MPHOSPH6Q99547 160 aaKnown RBP13.17□□□□□ -0.3
CCDC163-208ENST00000629670 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 TBX21Q9UL17 535 aa13.17□□□□□ -0.3
CCDC163-208ENST00000629670 SOWAHBA6NEL2 793 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms