RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SNAP25P60880 206 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 PLS1Q14651 629 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 CHURC1Q8WUH1 139 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 RAVER2Q9HCJ3 691 aaKnown RBP13.04□□□□□ -0.32
DDX41-219ENST00000629036 ASTN1O14525 1302 aa13.04□□□□□ -0.32
DDX41-219ENST00000629036 FDX1P10109 184 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 CACNB2Q08289 660 aaPredicted RBP13.03□□□□□ -0.32
DDX41-219ENST00000629036 TROAPQ12815 778 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 ADCK5Q3MIX3 580 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 OLFML2BQ68BL8 750 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 CHST3Q7LGC8 479 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 NCAPG2Q86XI2 1143 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 AGBL1Q96MI9 1066 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 LY9Q9HBG7 655 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
DDX41-219ENST00000629036 GJB1P08034 283 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 COPB2P35606 906 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 WDR78Q5VTH9 848 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 MAML3Q96JK9 1138 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.33
DDX41-219ENST00000629036 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 ZBED4O75132 1171 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 ICAM1P05362 532 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 PGK2P07205 417 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 FCER1AP12319 257 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 CYBAP13498 195 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 CCND3P30281 292 aaPredicted RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 HSPA4P34932 840 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 GJA8P48165 433 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 GRM4Q14833 912 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 MUM1L1Q5H9M0 696 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 GPATCH4Q5T3I0 446 aaKnown RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 IFIT1BQ5T764 474 aaKnown RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 Q7L0L9 218 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 MMP19Q99542 508 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 COL25A1Q9BXS0 654 aaPredicted RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.331e-5■■■□□ 18
DDX41-219ENST00000629036 KAT14Q9H8E8 782 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 BIN2Q9UBW5 565 aaPredicted RBP13.01□□□□□ -0.33
DDX41-219ENST00000629036 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
DDX41-219ENST00000629036 RPTORQ8N122 1335 aa13□□□□□ -0.33
DDX41-219ENST00000629036 PRC1O43663 620 aa13□□□□□ -0.33
DDX41-219ENST00000629036 CYP2C19P33261 490 aa13□□□□□ -0.33
DDX41-219ENST00000629036 UBXN2AP68543 259 aa13□□□□□ -0.33
DDX41-219ENST00000629036 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
DDX41-219ENST00000629036 TRDNQ13061 729 aa13□□□□□ -0.33
DDX41-219ENST00000629036 CCDC174Q6PII3 467 aa13□□□□□ -0.33
DDX41-219ENST00000629036 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
DDX41-219ENST00000629036 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
DDX41-219ENST00000629036 TRMT44Q8IYL2 757 aaKnown RBP13□□□□□ -0.33
DDX41-219ENST00000629036 FAM133AQ8N9E0 248 aa13□□□□□ -0.33
DDX41-219ENST00000629036 CHST13Q8NET6 341 aa13□□□□□ -0.33
DDX41-219ENST00000629036 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
DDX41-219ENST00000629036 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
DDX41-219ENST00000629036 RNF208Q9H0X6 261 aa13□□□□□ -0.33
DDX41-219ENST00000629036 A1CFQ9NQ94 594 aaKnown RBP13□□□□□ -0.33
DDX41-219ENST00000629036 RNF146Q9NTX7 359 aa13□□□□□ -0.33
DDX41-219ENST00000629036 DIS3Q9Y2L1 958 aaKnown RBP13□□□□□ -0.33
DDX41-219ENST00000629036 A0A1W2PPC1 479 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 IFIT3O14879 490 aaKnown RBP12.99□□□□□ -0.33
DDX41-219ENST00000629036 CYTH3O43739 400 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 EVI5O60447 810 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 PPP1R11O60927 126 aaPredicted RBP12.99□□□□□ -0.33
DDX41-219ENST00000629036 FARP2O94887 1054 aaPredicted RBP12.99□□□□□ -0.33
DDX41-219ENST00000629036 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 LHX8Q68G74 356 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 CASC1Q6TDU7 716 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
DDX41-219ENST00000629036 KATNBL1Q9H079 304 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 JMJD4Q9H9V9 463 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 SNX14Q9Y5W7 946 aa12.99□□□□□ -0.33
DDX41-219ENST00000629036 NFIBO00712 420 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 OPLAHO14841 1288 aa12.98□□□□□ -0.33
DDX41-219ENST00000629036 EPB41L2O43491 1005 aaKnown RBP12.98□□□□□ -0.33
DDX41-219ENST00000629036 SGPL1O95470 568 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms