RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 MAD2L2Q9UI95 211 aa15.87■□□□□ 0.13
SOX2-OT-248ENST00000628496 COBLO75128 1261 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 MYCP01106 439 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 INHAP05111 366 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 ICAM1P05362 532 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 HOXC6P09630 235 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 FCER1AP12319 257 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 CPA1P15085 419 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 TRIM32Q13049 653 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 GRM4Q14833 912 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 MTFR1Q15390 333 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 MMP19Q99542 508 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 MYL10Q9BUA6 226 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 FLRT1Q9NZU1 646 aa15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 BIN2Q9UBW5 565 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 COL11A1P12107 1806 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-248ENST00000628496 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 HMGCRP04035 888 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 PGK2P07205 417 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 LIFRP42702 1097 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 SOX10P56693 466 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 ADGRF4Q8IZF3 695 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 CHST13Q8NET6 341 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 HOMER2Q9NSB8 354 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 CCPG1Q9ULG6 757 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 WDR19Q8NEZ3 1342 aa15.85■□□□□ 0.13
SOX2-OT-248ENST00000628496 IGHA2P01877 340 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 ALAS1P13196 640 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 UBXN2AP68543 259 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 KCTD2Q14681 263 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 SLC35G1Q2M3R5 365 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 NFXL1Q6ZNB6 911 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 DPP9Q86TI2 863 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
SOX2-OT-248ENST00000628496 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 CCDC69A6NI79 296 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 KLRF2D3W0D1 207 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 DDAH1O94760 285 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 CCL5P13501 91 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 TKFCQ3LXA3 575 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 SGMS1Q86VZ5 419 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 NUP133Q8WUM0 1156 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 TRERF1Q96PN7 1200 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 UNC93B1Q9H1C4 597 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 ACAD9Q9H845 621 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 FBXO40Q9UH90 709 aa15.83■□□□□ 0.12
SOX2-OT-248ENST00000628496 DNAJC25-GNG10A0A024R161 153 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 SEC24BO95487 1268 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 CDC37Q16543 378 aaPredicted RBP15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 ZNF792Q3KQV3 632 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 MAML3Q96JK9 1138 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 MAP3K14Q99558 947 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 CENPFP49454 3210 aa15.82■□□□□ 0.12
SOX2-OT-248ENST00000628496 CYTH3O43739 400 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 RXRAP19793 462 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 RPS6KB1P23443 525 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 PSMA5P28066 241 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 CACNB2Q08289 660 aaPredicted RBP15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 OLFML2BQ68BL8 750 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 APOA5Q6Q788 366 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 ANKRD35Q8N283 1001 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 MTMR8Q96EF0 704 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 RNF208Q9H0X6 261 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 A1CFQ9NQ94 594 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
SOX2-OT-248ENST00000628496 NFIBO00712 420 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 CYP2C19P33261 490 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 USH1GQ495M9 461 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 CCDC144CPQ8IYA2 1237 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 FGD4Q96M96 766 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 RIOX1Q9H6W3 641 aa15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 PAK6Q9NQU5 681 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-248ENST00000628496 DIS3Q9Y2L1 958 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms