RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 PICK1Q9NRD5 415 aa9.21□□□□□ -0.94
TCF4-260ENST00000627685 CPA4Q9UI42 421 aa9.21□□□□□ -0.94
TCF4-260ENST00000627685 SERPINB13Q9UIV8 391 aa9.21□□□□□ -0.94
TCF4-260ENST00000627685 PTPN22Q9Y2R2 807 aa9.21□□□□□ -0.94
TCF4-260ENST00000627685 TRIM17Q9Y577 477 aa9.21□□□□□ -0.94
TCF4-260ENST00000627685 PARP14Q460N5 1801 aa9.21□□□□□ -0.94
TCF4-260ENST00000627685 IGKV6D-41A0A0C4DH26 115 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 RNF113AO15541 343 aaKnown RBP9.2□□□□□ -0.94
TCF4-260ENST00000627685 GPAA1O43292 621 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 CNMDO75829 334 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 GLRX3O76003 335 aaKnown RBP9.2□□□□□ -0.94
TCF4-260ENST00000627685 GNRH1P01148 92 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 NR3C2P08235 984 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 ASNSP08243 561 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 USP5P45974 858 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 HMGCS2P54868 508 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 BACE1P56817 501 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 AAMPQ13685 434 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 VPS53Q5VIR6 699 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 C16orf86Q6ZW13 317 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 CRNKL1Q9BZJ0 848 aaKnown RBP9.2□□□□□ -0.94
TCF4-260ENST00000627685 LNPKQ9C0E8 428 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 KIAA1683Q9H0B3 1180 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 ATP8A2Q9NTI2 1148 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 GINM1Q9NU53 330 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 GPSM3Q9Y4H4 160 aa9.2□□□□□ -0.94
TCF4-260ENST00000627685 BAZ2AQ9UIF9 1905 aaKnown RBP9.2□□□□□ -0.94
TCF4-260ENST00000627685 A0A0D9SFI3 127 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 USP17L12C9JPN9 530 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 USP17L21D6R901 530 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 AKR1B1P15121 316 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 GSPT1P15170 499 aaKnown RBP9.19□□□□□ -0.94
TCF4-260ENST00000627685 RASA1P20936 1047 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 FSHRP23945 695 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 HOXA7P31268 230 aaPredicted RBP9.19□□□□□ -0.94
TCF4-260ENST00000627685 PRMT2P55345 433 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 IRX6P78412 446 aaPredicted RBP9.19□□□□□ -0.94
TCF4-260ENST00000627685 SEPT2Q15019 361 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 SBK1Q52WX2 424 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 CCDC129Q6ZRS4 1044 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 ZNF589Q86UQ0 364 aaPredicted RBP9.19□□□□□ -0.94
TCF4-260ENST00000627685 ADAM32Q8TC27 787 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 PARK7Q99497 189 aaKnown RBP9.19□□□□□ -0.94
TCF4-260ENST00000627685 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 ASCC2Q9H1I8 757 aaPredicted RBP9.19□□□□□ -0.94
TCF4-260ENST00000627685 MCM9Q9NXL9 1143 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 MORF4L1Q9UBU8 362 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 MAP4K5Q9Y4K4 846 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 PTCH2Q9Y6C5 1203 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 PLIN4Q96Q06 1357 aa9.19□□□□□ -0.94
TCF4-260ENST00000627685 IGHA2P01877 340 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 BMP1P13497 986 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 KIF22Q14807 665 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 ANKRD45Q5TZF3 282 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 GADL1Q6ZQY3 521 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 CHD1LQ86WJ1 897 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 SHISA4Q96DD7 197 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 FAM227BQ96M60 508 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■■□ 20.9
TCF4-260ENST00000627685 ZNF236Q9UL36 1845 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 GABRQQ9UN88 632 aa9.18□□□□□ -0.94
TCF4-260ENST00000627685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.18□□□□□ -0.94
TCF4-260ENST00000627685 ZIC2O95409 532 aaPredicted RBP9.17□□□□□ -0.94
TCF4-260ENST00000627685 HLA-DOAP06340 250 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 TIMP2P16035 220 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 VCAM1P19320 739 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 CDK8P49336 464 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 SOX10P56693 466 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 GIMAP6Q6P9H5 292 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 LBX2Q6XYB7 198 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 TTC6Q86TZ1 520 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 CRACR2BQ8N4Y2 399 aaPredicted RBP9.17□□□□□ -0.94
TCF4-260ENST00000627685 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 GJD2Q9UKL4 321 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 SLC4A4Q9Y6R1 1079 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 MGAMO43451 1857 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 LAMA4Q16363 1823 aa9.17□□□□□ -0.94
TCF4-260ENST00000627685 MKI67P46013 3256 aaKnown RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 ZFYP08048 801 aaPredicted RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 HOXD10P28358 340 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 NOVP48745 357 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 PRKCZQ05513 592 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 ABCB5Q2M3G0 1257 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 CERKLQ49MI3 558 aaPredicted RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 USP6NLQ92738 828 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 KCTD15Q96SI1 283 aaPredicted RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 P2RX7Q99572 595 aaKnown RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 KLF16Q9BXK1 252 aaPredicted RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 PORCNQ9H237 461 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 AS3MTQ9HBK9 375 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 ARPP21Q9UBL0 812 aaPredicted RBP9.16□□□□□ -0.94
TCF4-260ENST00000627685 SRRDQ9UH36 339 aa9.16□□□□□ -0.94
TCF4-260ENST00000627685 SWAP70Q9UH65 585 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms