RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 DEFB123Q8N688 67 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 TRIM43Q96BQ3 446 aaPredicted RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.15□□□□□ -0.62
CHD2-210ENST00000627200 PRKAG2Q9UGJ0 569 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 ANAPC4Q9UJX5 808 aa11.15□□□□□ -0.62
CHD2-210ENST00000627200 ASTN1O14525 1302 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 TRIM6-TRIM34B2RNG4 842 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 PQBP1O60828 265 aaKnown RBP11.14□□□□□ -0.63
CHD2-210ENST00000627200 FGAP02671 866 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 ITGB8P26012 769 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 OAZ1P54368 228 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 TLE2Q04725 743 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 MCMDC2Q4G0Z9 681 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 C9orf50Q5SZB4 431 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 TTBK2Q6IQ55 1244 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 MAMDC4Q6UXC1 1216 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD2-210ENST00000627200 ARMCX2Q7L311 632 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 RNF180Q86T96 592 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 TBC1D10CQ8IV04 446 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 SMC5Q8IY18 1101 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 CCDC144CPQ8IYA2 1237 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 EXOC6Q8TAG9 804 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 STAG1Q8WVM7 1258 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 BADQ92934 168 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 RILPL2Q969X0 211 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
CHD2-210ENST00000627200 HELLSQ9NRZ9 838 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 TOMM22Q9NS69 142 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 RNF146Q9NTX7 359 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 PRR12Q9ULL5 1215 aa11.14□□□□□ -0.63
CHD2-210ENST00000627200 LAMA2P24043 3122 aaKnown RBP11.14□□□□□ -0.63
CHD2-210ENST00000627200 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
CHD2-210ENST00000627200 CCDC171Q6TFL3 1326 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 ORC4O43929 436 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 HSPD1P10809 573 aaKnown RBP11.13□□□□□ -0.63
CHD2-210ENST00000627200 ALAS1P13196 640 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 SLC16A2P36021 539 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 ACLYP53396 1101 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 ACVR2BQ13705 512 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 SHHQ15465 462 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 ALX1Q15699 326 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 CCDC144BQ3MJ40 725 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 MUM1L1Q5H9M0 696 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 ZNF467Q7Z7K2 595 aaPredicted RBP11.13□□□□□ -0.63
CHD2-210ENST00000627200 FAM160B2Q86V87 743 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 MSL3Q8N5Y2 521 aaKnown RBP11.13□□□□□ -0.63
CHD2-210ENST00000627200 CHST13Q8NET6 341 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 PURBQ96QR8 312 aaKnown RBP11.13□□□□□ -0.63
CHD2-210ENST00000627200 KATNBL1Q9H079 304 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 ACAD9Q9H845 621 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 FAM184BQ9ULE4 1060 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 LAMA4Q16363 1823 aa11.13□□□□□ -0.63
CHD2-210ENST00000627200 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.12□□□□□ -0.63
CHD2-210ENST00000627200 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 FGRP09769 529 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 C6orf222P0C671 652 aaPredicted RBP11.12□□□□□ -0.63
CHD2-210ENST00000627200 NOVP48745 357 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 EPHB4P54760 987 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 KCNA10Q16322 511 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 C1orf53Q5VUE5 145 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 CCSAPQ6IQ19 270 aaPredicted RBP11.12□□□□□ -0.63
CHD2-210ENST00000627200 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 PLEKHM2Q8IWE5 1019 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 FAM133AQ8N9E0 248 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 KLHDC9Q8NEP7 349 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 CHURC1Q8WUH1 139 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 TMEM47Q9BQJ4 181 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
CHD2-210ENST00000627200 ZMYM6O95789 1325 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 NEDD4P46934 1319 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 CTAGE5O15320 804 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
CHD2-210ENST00000627200 CLTBP09497 229 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 SDSP20132 328 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 NUCB1Q02818 461 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 CHD1LQ86WJ1 897 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 DCAF4Q8WV16 495 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 FAM161BQ96MY7 647 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 MTMR10Q9NXD2 777 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 CCPG1Q9ULG6 757 aa11.11□□□□□ -0.63
CHD2-210ENST00000627200 NFIBO00712 420 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 PLA2G6O60733 806 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 ASGR1P07306 291 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 FDX1P10109 184 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 BEX3Q00994 111 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 FAAP100Q0VG06 881 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 PPP4R3BQ5MIZ7 849 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 CWC27Q6UX04 472 aaKnown RBP11.1□□□□□ -0.63
CHD2-210ENST00000627200 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 EEPD1Q7L9B9 569 aa11.1□□□□□ -0.63
CHD2-210ENST00000627200 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms