RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 RASEFQ8IZ41 740 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 AGBL1Q96MI9 1066 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 NEK1Q96PY6 1258 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 RNF208Q9H0X6 261 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 UNC93B1Q9H1C4 597 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 SENP2Q9HC62 589 aa23.37■■□□□ 1.33
PNKP-219ENST00000626274 POTEFA5A3E0 1075 aa23.36■■□□□ 1.33
PNKP-219ENST00000626274 EPB41L2O43491 1005 aaKnown RBP23.36■■□□□ 1.33
PNKP-219ENST00000626274 ICAM1P05362 532 aa23.36■■□□□ 1.33
PNKP-219ENST00000626274 RGS19P49795 217 aa23.36■■□□□ 1.33
PNKP-219ENST00000626274 KCNB2Q92953 911 aa23.36■■□□□ 1.33
PNKP-219ENST00000626274 UBA5Q9GZZ9 404 aa23.36■■□□□ 1.33
PNKP-219ENST00000626274 ALAS1P13196 640 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 TRIM32Q13049 653 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 MFSD14CQ5VZR4 134 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.35■■□□□ 1.33
PNKP-219ENST00000626274 CATIPQ7Z7H3 387 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 TMTC2Q8N394 836 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 DDX11Q96FC9 970 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 LY9Q9HBG7 655 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 HOMER2Q9NSB8 354 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 RNF146Q9NTX7 359 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 FLRT1Q9NZU1 646 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 PNMA2Q9UL42 364 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
PNKP-219ENST00000626274 GJB1P08034 283 aa23.34■■□□□ 1.33
PNKP-219ENST00000626274 COL9A3Q14050 684 aaPredicted RBP23.34■■□□□ 1.33
PNKP-219ENST00000626274 MAP3K21Q5TCX8 1036 aa23.34■■□□□ 1.33
PNKP-219ENST00000626274 OLFML2BQ68BL8 750 aa23.34■■□□□ 1.33
PNKP-219ENST00000626274 TRERF1Q96PN7 1200 aa23.34■■□□□ 1.33
PNKP-219ENST00000626274 CPVLQ9H3G5 476 aa23.34■■□□□ 1.33
PNKP-219ENST00000626274 ACAD9Q9H845 621 aa23.34■■□□□ 1.33
PNKP-219ENST00000626274 HMX1Q9NP08 348 aaPredicted RBP23.34■■□□□ 1.33
PNKP-219ENST00000626274 GPHNQ9NQX3 736 aaPredicted RBP23.34■■□□□ 1.33
PNKP-219ENST00000626274 RPTORQ8N122 1335 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 KLRF2D3W0D1 207 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 SH2B2O14492 632 aaPredicted RBP23.33■■□□□ 1.33
PNKP-219ENST00000626274 PGK2P07205 417 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 PRKAR2AP13861 404 aaKnown RBP23.33■■□□□ 1.33
PNKP-219ENST00000626274 TROAPQ12815 778 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 GRM4Q14833 912 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 ADCK5Q3MIX3 580 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 DHX32Q7L7V1 743 aaKnown RBP23.33■■□□□ 1.33
PNKP-219ENST00000626274 ANKRD35Q8N283 1001 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 STAG2Q8N3U4 1231 aa23.33■■□□□ 1.33
PNKP-219ENST00000626274 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.33■■□□□ 1.33
PNKP-219ENST00000626274 DIS3Q9Y2L1 958 aaKnown RBP23.33■■□□□ 1.33
PNKP-219ENST00000626274 WDR19Q8NEZ3 1342 aa23.33■■□□□ 1.32
PNKP-219ENST00000626274 BAZ2BQ9UIF8 2168 aaKnown RBP23.33■■□□□ 1.32
PNKP-219ENST00000626274 PALM3A6NDB9 673 aaPredicted RBP23.32■■□□□ 1.32
PNKP-219ENST00000626274 DHX16O60231 1041 aaKnown RBP23.32■■□□□ 1.32
PNKP-219ENST00000626274 HMGB1P09429 215 aaKnown RBP23.32■■□□□ 1.32
PNKP-219ENST00000626274 LIFRP42702 1097 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 CACNB2Q08289 660 aaPredicted RBP23.32■■□□□ 1.32
PNKP-219ENST00000626274 ZNF792Q3KQV3 632 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 NFXL1Q6ZNB6 911 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 ADGRF4Q8IZF3 695 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 MAML3Q96JK9 1138 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 PAK6Q9NQU5 681 aaPredicted RBP23.32■■□□□ 1.32
PNKP-219ENST00000626274 MAD2L2Q9UI95 211 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 SNX14Q9Y5W7 946 aa23.32■■□□□ 1.32
PNKP-219ENST00000626274 CENPFP49454 3210 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 DNAJC25-GNG10A0A024R161 153 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 CCDC69A6NI79 296 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 IGHA2P01877 340 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 EN2P19622 333 aaPredicted RBP23.31■■□□□ 1.32
PNKP-219ENST00000626274 ZNF654Q8IZM8 581 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 USP26Q9BXU7 913 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 LRRC2Q9BYS8 371 aa23.31■■□□□ 1.32
PNKP-219ENST00000626274 DDAH1O94760 285 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 CYP2C19P33261 490 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 GJA8P48165 433 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 EXOSC10Q01780 885 aaKnown RBP23.3■■□□□ 1.32
PNKP-219ENST00000626274 CDC37Q16543 378 aaPredicted RBP23.3■■□□□ 1.32
PNKP-219ENST00000626274 MUM1L1Q5H9M0 696 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 NUP133Q8WUM0 1156 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 MAP3K14Q99558 947 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 VAT1LQ9HCJ6 419 aa23.3■■□□□ 1.32
PNKP-219ENST00000626274 A1CFQ9NQ94 594 aaKnown RBP23.3■■□□□ 1.32
PNKP-219ENST00000626274 U2AF1L4Q8WU68 220 aaKnown RBP23.29■■□□□ 1.32
PNKP-219ENST00000626274 DEFB118Q96PH6 123 aa23.29■■□□□ 1.32
PNKP-219ENST00000626274 JMJD4Q9H9V9 463 aa23.29■■□□□ 1.32
PNKP-219ENST00000626274 PFASO15067 1338 aa23.29■■□□□ 1.32
PNKP-219ENST00000626274 MCM3APO60318 1980 aa23.29■■□□□ 1.32
PNKP-219ENST00000626274 SGPL1O95470 568 aa23.28■■□□□ 1.32
PNKP-219ENST00000626274 TAL1P17542 331 aaPredicted RBP23.28■■□□□ 1.32
PNKP-219ENST00000626274 SGMS1Q86VZ5 419 aa23.28■■□□□ 1.32
PNKP-219ENST00000626274 CTCFLQ8NI51 663 aaPredicted RBP23.28■■□□□ 1.32
PNKP-219ENST00000626274 TCEANC2Q96MN5 208 aa23.28■■□□□ 1.32
PNKP-219ENST00000626274 JAKMIP1Q96N16 626 aaKnown RBP23.28■■□□□ 1.32
PNKP-219ENST00000626274 MYL10Q9BUA6 226 aa23.28■■□□□ 1.32
PNKP-219ENST00000626274 SLC12A7Q9Y666 1083 aa23.28■■□□□ 1.32
PNKP-219ENST00000626274 CALM1P0DP23 149 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 CALM2P0DP24 149 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 CALM3P0DP25 149 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 CAPN2P17655 700 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 CCND3P30281 292 aaPredicted RBP23.27■■□□□ 1.32
PNKP-219ENST00000626274 KIF5BP33176 963 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 QRICH1Q2TAL8 776 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 ZNF467Q7Z7K2 595 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms