RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 ATP2A1O14983 1001 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
CHD2-205ENST00000625662 AP3B2Q13367 1082 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 DEPDC5O75140 1603 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 TNNT1P13805 278 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 GTF2A2P52657 109 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 KIF11P52732 1056 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 NEDD9Q14511 834 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 RASAL2Q9UJF2 1139 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 UTYO14607 1347 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 UBASH3AP57075 661 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 PRPF4BQ13523 1007 aaKnown RBP13.04□□□□□ -0.32
CHD2-205ENST00000625662 LPAR1Q92633 364 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 MYL10Q9BUA6 226 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 VPS54Q9P1Q0 977 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 STIM2Q9P246 746 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
CHD2-205ENST00000625662 PLIN2Q99541 437 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 ACAD9Q9H845 621 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 IKBKGQ9Y6K9 419 aa13.04□□□□□ -0.32
CHD2-205ENST00000625662 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 STK10O94804 968 aaKnown RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 BCRP11274 1271 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 FCGRTP55899 365 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 JAK3P52333 1124 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 TBC1D8BQ0IIM8 1120 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 SCARF1Q14162 830 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 TMC6Q7Z403 805 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 NSUN6Q8TEA1 469 aaKnown RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 CASQ1P31415 396 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
CHD2-205ENST00000625662 ELP3Q9H9T3 547 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
CHD2-205ENST00000625662 TYW5A2RUC4 315 aaKnown RBP13.02□□□□□ -0.32
CHD2-205ENST00000625662 TNNI1P19237 187 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 EPHX2P34913 555 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 ARID5AQ03989 594 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 SPP2Q13103 211 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 SURF1Q15526 300 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 MED10Q9BTT4 135 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 CSRNP2Q9H175 543 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 SERPINA10Q9UK55 444 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 A0A0D9SFI3 127 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 GAP43P17677 238 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 PTPREP23469 700 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 MTX1Q13505 466 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 TRIM14Q14142 442 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 MAEAQ7L5Y9 396 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 GRPEL1Q9HAV7 217 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
CHD2-205ENST00000625662 IQGAP1P46940 1657 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 TMEM191BP0C7N4 346 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 FAM160A1Q05DH4 1040 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 SLC25A27O95847 323 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 GPATCH11Q8N954 259 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 OTUD7AQ8TE49 926 aaPredicted RBP13.02□□□□□ -0.33
CHD2-205ENST00000625662 FAM151AQ8WW52 585 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 PHKBQ93100 1093 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 ZNF830Q96NB3 372 aaPredicted RBP13.02□□□□□ -0.33
CHD2-205ENST00000625662 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
CHD2-205ENST00000625662 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 DAPK3O43293 454 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 ELF1P32519 619 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 SKIDA1Q1XH10 827 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 ANGEL2Q5VTE6 544 aaKnown RBP13.01□□□□□ -0.33
CHD2-205ENST00000625662 SNRNP48Q6IEG0 339 aaKnown RBP13.01□□□□□ -0.33
CHD2-205ENST00000625662 GPBP1Q86WP2 473 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 BCCIPQ9P287 314 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHD2-205ENST00000625662 ITPK1Q13572 414 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 RASA3Q14644 834 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHD2-205ENST00000625662 TAX1BP1Q86VP1 789 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 SH3RF3Q8TEJ3 882 aaPredicted RBP13.01□□□□□ -0.33
CHD2-205ENST00000625662 FAM81BQ96LP2 452 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 CUEDC2Q9H467 287 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 MYOZ2Q9NPC6 264 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 PCDHA4Q9UN74 947 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 NOC2LQ9Y3T9 749 aaKnown RBP13.01□□□□□ -0.33
CHD2-205ENST00000625662 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 TACC1O75410 805 aa13.01□□□□□ -0.33
CHD2-205ENST00000625662 KATNAL1Q9BW62 490 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms