RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 NEDD4P46934 1319 aa23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 TSPY2A6NKD2 308 aa23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 KBTBD13C9JR72 458 aa23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 MAGEA10P43363 369 aaPredicted RBP23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 MFSD6Q6ZSS7 791 aa23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 STOX1Q6ZVD7 989 aa23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 KCNB2Q92953 911 aa23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 RNF41Q9H4P4 317 aaPredicted RBP23.42■■□□□ 1.34
R3HCC1-210ENST00000625275 SZT2Q5T011 3432 aa23.41■■□□□ 1.34
R3HCC1-210ENST00000625275 LCTP09848 1927 aa23.41■■□□□ 1.34
R3HCC1-210ENST00000625275 PCP11498 1178 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-210ENST00000625275 GMCL1Q96IK5 515 aa23.41■■□□□ 1.34
R3HCC1-210ENST00000625275 RAVER2Q9HCJ3 691 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-210ENST00000625275 ISY1Q9ULR0 285 aaKnown RBP23.41■■□□□ 1.34
R3HCC1-210ENST00000625275 E7EWF7 191 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 ORC4O43929 436 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 MCCP23508 829 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 SLC4A3P48751 1232 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 ATN1P54259 1190 aaPredicted RBP23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 OAZ1P54368 228 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 DDX11Q96FC9 970 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 STX8Q9UNK0 236 aa23.4■■□□□ 1.34
R3HCC1-210ENST00000625275 DNAJC25-GNG10A0A024R161 153 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 TMEM232C9JQI7 657 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 FDX1P10109 184 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 STAT2P52630 851 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 TSGA10IPQ3SY00 556 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 RRP12Q5JTH9 1297 aaKnown RBP23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 IL17RBQ9NRM6 502 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 TOMM22Q9NS69 142 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 SNX14Q9Y5W7 946 aa23.39■■□□□ 1.34
R3HCC1-210ENST00000625275 LRRC37A2A6NM11 1700 aa23.39■■□□□ 1.33
R3HCC1-210ENST00000625275 RANBP6O60518 1105 aaKnown RBP23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 NMT2O60551 498 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 MYCNP04198 464 aaPredicted RBP23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 RARBP10826 455 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 SLC1A4P43007 532 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 LRRC41Q15345 812 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 FAM160B2Q86V87 743 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 MSL3Q8N5Y2 521 aaKnown RBP23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 FBXO40Q9UH90 709 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 LAMA3Q16787 3333 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 MYH6P13533 1939 aa23.38■■□□□ 1.33
R3HCC1-210ENST00000625275 TAL1P17542 331 aaPredicted RBP23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 RTP1P59025 263 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 CHST13Q8NET6 341 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 CHURC1Q8WUH1 139 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 CNNM2Q9H8M5 875 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 UPF2Q9HAU5 1272 aaKnown RBP23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 XPNPEP3Q9NQH7 507 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 CNPY2Q9Y2B0 182 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 SYNGAP1Q96PV0 1343 aa23.37■■□□□ 1.33
R3HCC1-210ENST00000625275 B4E1Z4 1266 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 SOX1O00570 391 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 ZNF865P0CJ78 1059 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 IKQ13123 557 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 ADCK5Q3MIX3 580 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 AKR1A1P14550 325 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 MAMDC4Q6UXC1 1216 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 ZNF467Q7Z7K2 595 aaPredicted RBP23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 ANKRD35Q8N283 1001 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 CHMP4CQ96CF2 233 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 KRT23Q9C075 422 aa23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 UBE2OQ9C0C9 1292 aaKnown RBP23.36■■□□□ 1.33
R3HCC1-210ENST00000625275 PLA2G6O60733 806 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 KDM4AO75164 1064 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 NOVP48745 357 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 TRDNQ13061 729 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 COL9A3Q14050 684 aaPredicted RBP23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 KRT32Q14532 448 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 SLC39A5Q6ZMH5 540 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 KCTD1Q719H9 257 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 TDHQ8IZJ6 230 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 NCOA7Q8NI08 942 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 ESR2Q92731 530 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 HOMER2Q9NSB8 354 aa23.35■■□□□ 1.33
R3HCC1-210ENST00000625275 ADCYAP1R1P41586 468 aa23.34■■□□□ 1.33
R3HCC1-210ENST00000625275 SNX17Q15036 470 aa23.34■■□□□ 1.33
R3HCC1-210ENST00000625275 RCSD1Q6JBY9 416 aa23.34■■□□□ 1.33
R3HCC1-210ENST00000625275 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
R3HCC1-210ENST00000625275 RALYLQ86SE5 291 aaKnown RBP23.34■■□□□ 1.33
R3HCC1-210ENST00000625275 ATP11BQ9Y2G3 1177 aa23.34■■□□□ 1.33
R3HCC1-210ENST00000625275 ZNF536O15090 1300 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 SNAI1O95863 264 aaPredicted RBP23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 ANAPC15P60006 121 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 MDM2Q00987 491 aaPredicted RBP23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 RNF180Q86T96 592 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 MB21D2Q8IYB1 491 aaPredicted RBP23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 LENG1Q96BZ8 264 aaPredicted RBP23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 LRCH3Q96II8 777 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 FGD4Q96M96 766 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 ACAD9Q9H845 621 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 ZSWIM5Q9P217 1185 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 PHF24Q9UPV7 400 aa23.33■■□□□ 1.33
R3HCC1-210ENST00000625275 PGK1P00558 417 aa23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 RBM25P49756 843 aaKnown RBP23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 NT5C2P49902 561 aa23.32■■□□□ 1.32
R3HCC1-210ENST00000625275 FERMT2Q96AC1 680 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms