RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 CYTH3O43739 400 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 TSPY3P0CV98 308 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 TSPY8P0CW00 308 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 CCT6AP40227 531 aaKnown RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 UBA7P41226 1012 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 NOVP48745 357 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 STIM1Q13586 685 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 WHAMMP3Q1A5X7 153 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF569Q5MCW4 686 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF804AQ7Z570 1209 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 MSL3Q8N5Y2 521 aaKnown RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 NEDD1Q8NHV4 660 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 RASGRP4Q8TDF6 673 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 HNRNPLLQ8WVV9 542 aaKnown RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 DNAJC7Q99615 494 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 C7orf25Q9BPX7 421 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZMYND12Q9H0C1 365 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF287Q9HBT7 754 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 LZTFL1Q9NQ48 299 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZHX1Q9UKY1 873 aaPredicted RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 RAB21Q9UL25 225 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 CAPN11Q9UMQ6 739 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 RTCBQ9Y3I0 505 aaKnown RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 SNED1Q8TER0 1413 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 FLT1P17948 1338 aa10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 GPR75-ASB3A0A0A6YYF3 556 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 A0A0U1RQJ8 604 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 ESYT2A0FGR8 921 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 CTAGE9A4FU28 777 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 CCDC151A5D8V7 595 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 USP17L3A6NCW0 530 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 USP17L4A6NCW7 530 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 PSMA7O14818 248 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 GNPATO15228 680 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 SRGNP10124 158 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 KRT9P35527 623 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 KCNQ4P56696 695 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 INF2Q27J81 1249 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 TTI2Q6NXR4 508 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 SMIM5Q71RC9 77 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 USP17L1Q7RTZ2 530 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 SLC35F6Q8N357 371 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 ACRBPQ8NEB7 543 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 OR8K1Q8NGG5 319 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 ATRIPQ8WXE1 791 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 ARHGEF1Q92888 912 aaKnown RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 NUP88Q99567 741 aaPredicted RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 NAPGQ99747 312 aaPredicted RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 DUSP9Q99956 384 aaKnown RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 RTFDC1Q9BY42 306 aaPredicted RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 ARFGAP3Q9NP61 516 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 EPN1Q9Y6I3 576 aaPredicted RBP10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
IGHV3-54-201ENST00000622166 KLRF2D3W0D1 207 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 COBLO75128 1261 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 SEC31AO94979 1220 aaKnown RBP10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 TUBBP07437 444 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 PLCG2P16885 1265 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 ATP2B4P23634 1241 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 CCNE1P24864 410 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 CDC25AP30304 524 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 CDK8P49336 464 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 DNM2P50570 870 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 AMPD2Q01433 879 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 UBXN1Q04323 297 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 NONOQ15233 471 aaKnown RBP eCLIP10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 GRIK5Q16478 980 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 KIF4BQ2VIQ3 1234 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 HEATR3Q7Z4Q2 680 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 CABP7Q86V35 215 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 RETREG2Q8NC44 543 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 TGFBRAP1Q8WUH2 860 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 FAM163AQ96GL9 167 aaPredicted RBP10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 NUP58Q9BVL2 599 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 FUT8Q9BYC5 575 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 EPC1Q9H2F5 836 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 C6orf50Q9HD87 102 aa10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 REXO2Q9Y3B8 237 aaKnown RBP10.8□□□□□ -0.68
IGHV3-54-201ENST00000622166 TTC26A0AVF1 554 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 BICDL2A1A5D9 508 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 TRIM49BA6NDI0 452 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 PP2D1A8MPX8 630 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 MAP2K7O14733 419 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 SASH3O75995 380 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 NDUFA10O95299 355 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 IL1R1P14778 569 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 GNA11P29992 359 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 PMS1P54277 932 aaKnown RBP10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 PIP4K2BP78356 416 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms