RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 TMEM87AQ8NBN3 555 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 TNFRSF25Q93038 417 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 COA7Q96BR5 231 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 ZNF396Q96N95 335 aaPredicted RBP12.25□□□□□ -0.45
CPNE3-212ENST00000621783 SLF1Q9BQI6 1058 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 FTOQ9C0B1 505 aaKnown RBP eCLIP12.25□□□□□ -0.45
CPNE3-212ENST00000621783 TANGO6Q9C0B7 1094 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 RANBP17Q9H2T7 1088 aaKnown RBP12.25□□□□□ -0.45
CPNE3-212ENST00000621783 TMOD4Q9NZQ9 345 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 PCDHA4Q9UN74 947 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 FAM205CA6NFA0 338 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 FKBP1BP68106 108 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 PPIL2Q13356 520 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
CPNE3-212ENST00000621783 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
CPNE3-212ENST00000621783 OPTNQ96CV9 577 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 TRPM7Q96QT4 1865 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 AMNQ9BXJ7 453 aa12.24□□□□□ -0.45
CPNE3-212ENST00000621783 GBA2Q9HCG7 927 aaPredicted RBP12.24□□□□□ -0.45
CPNE3-212ENST00000621783 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
CPNE3-212ENST00000621783 TCHHQ07283 1943 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 RLFQ13129 1914 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 A0A0G2JMZ2 1700 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 A0A0G2JLL6 359 aaPredicted RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 M0R2N6 131 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 FLOT1O75955 427 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 CELF2O95319 508 aaKnown RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 TAL1P17542 331 aaPredicted RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 PTMSP20962 102 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 ADCY7P51828 1080 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 CSPP1Q1MSJ5 1256 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 ATL3Q6DD88 541 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 CCDC174Q6PII3 467 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 PRRT2Q7Z6L0 340 aaPredicted RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 FBXO11Q86XK2 927 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 RASGRP4Q8TDF6 673 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 C6orf50Q9HD87 102 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 LMBRD1Q9NUN5 540 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 PPP1R9AQ9ULJ8 1098 aa12.23□□□□□ -0.45
CPNE3-212ENST00000621783 RBBP6Q7Z6E9 1792 aaKnown RBP12.23□□□□□ -0.45
CPNE3-212ENST00000621783 UNCXA6NJT0 531 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 IRF6O14896 467 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
CPNE3-212ENST00000621783 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-212ENST00000621783 GNA11P29992 359 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 GJA5P36382 358 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 CEBPZQ03701 1054 aaKnown RBP12.22□□□□□ -0.45
CPNE3-212ENST00000621783 USH1GQ495M9 461 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-212ENST00000621783 SPATA32Q96LK8 384 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 SCAND2PQ9GZW5 306 aaPredicted RBP12.22□□□□□ -0.45
CPNE3-212ENST00000621783 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 CFAP45Q9UL16 551 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 KCNH4Q9UQ05 1017 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 PCDHA1Q9Y5I3 950 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 CLIC4Q9Y696 253 aa12.22□□□□□ -0.45
CPNE3-212ENST00000621783 ELP1O95163 1332 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 CCDC194A0A1B0GVG4 234 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 CXCL11O14625 94 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 DSG3P32926 999 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
CPNE3-212ENST00000621783 TOB1P50616 345 aaPredicted RBP12.21□□□□□ -0.45
CPNE3-212ENST00000621783 RILPL1Q5EBL4 403 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 TREML2Q5T2D2 321 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 ANO1Q5XXA6 986 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 GADL1Q6ZQY3 521 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 PIK3AP1Q6ZUJ8 805 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
CPNE3-212ENST00000621783 C2orf69Q8N8R5 385 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.45
CPNE3-212ENST00000621783 BICD2Q8TD16 824 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 CUL5Q93034 780 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 ATG4CQ96DT6 458 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
CPNE3-212ENST00000621783 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 TMEM260Q9NX78 707 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
CPNE3-212ENST00000621783 NOL7Q9UMY1 257 aaKnown RBP12.21□□□□□ -0.45
CPNE3-212ENST00000621783 ZNF536O15090 1300 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms