RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RRP1BQ14684 758 aaKnown RBP19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 REXO1Q8N1G1 1221 aaKnown RBP19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 PAGE5Q96GU1 130 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 VPS33BQ9H267 617 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 NRBP1Q9UHY1 535 aa19.71■□□□□ 0.75
PCDHGC3-205ENST00000617641 LETM2Q2VYF4 491 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 SMTNL1A8MU46 457 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 GH2P01242 217 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 PTGS1P23219 599 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 CASP1P29466 404 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 CDC25AP30304 524 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 LONP1P36776 959 aaKnown RBP19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 ADCY7P51828 1080 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 SLFN13Q68D06 897 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 SH3RF1Q7Z6J0 888 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 MRFAP1L1Q96HT8 127 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 KCNF1Q9H3M0 494 aa19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 PPP1R1BQ9UD71 204 aaPredicted RBP19.7■□□□□ 0.74
PCDHGC3-205ENST00000617641 IKBKBO14920 756 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 POLD1P28340 1107 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 CDC25BP30305 580 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 SLC1A4P43007 532 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 E2F4Q16254 413 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 TBCKQ8TEA7 893 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 CCNT1O60563 726 aaKnown RBP19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 CXCL9Q07325 125 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 MORC3Q14149 939 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 RBM26Q5T8P6 1007 aaKnown RBP19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 DTHD1Q6ZMT9 781 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 CCDC186Q7Z3E2 898 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 NEK8Q86SG6 692 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 SPATA20Q8TB22 786 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 DCAF4Q8WV16 495 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 CCDC34Q96HJ3 373 aa19.69■□□□□ 0.74
PCDHGC3-205ENST00000617641 ZBTB5O15062 677 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 SPDYE2Q495Y8 402 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 MTMR8Q96EF0 704 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 MTFR1LQ9H019 292 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 VEZTQ9HBM0 779 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 CNTNAP1P78357 1384 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 TPM3P06753 285 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 LMOD1P29536 600 aaPredicted RBP19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 TPM4P67936 248 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 IQUBQ8NA54 791 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 FAM151AQ8WW52 585 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 STAMQ92783 540 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 HSD3B7Q9H2F3 369 aa19.68■□□□□ 0.74
PCDHGC3-205ENST00000617641 PP2D1A8MPX8 630 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 SMC2O95347 1197 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 MYL5Q02045 173 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 AGBL3Q8NEM8 1001 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 ARFGEF1Q9Y6D6 1849 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 F5H6K3 240 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 LAD1O00515 517 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 KLRC3Q07444 240 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 PPP1R18Q6NYC8 613 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 PDXDC2PQ6P474 469 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 CCDC125Q86Z20 511 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 TRIML1Q8N9V2 468 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 NUP88Q99567 741 aaPredicted RBP19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 TAOK3Q9H2K8 898 aa19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 HERC5Q9UII4 1024 aaKnown RBP19.67■□□□□ 0.74
PCDHGC3-205ENST00000617641 NEMFO60524 1076 aa19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 DPYDQ12882 1025 aa19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 KARSQ15046 597 aaKnown RBP19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 UBE2SQ16763 222 aa19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 CDAN1Q8IWY9 1227 aa19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 RIC8AQ9NPQ8 531 aa19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 BRCA1P38398 1863 aaKnown RBP19.66■□□□□ 0.74
PCDHGC3-205ENST00000617641 NDUFB10O96000 172 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 OR52Z1P0C646 297 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 TXLNAP40222 546 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 PRPHP41219 470 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 MLKLQ8NB16 471 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 FER1L6Q2WGJ9 1857 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 SHTN1A0MZ66 631 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 ATP1A3P13637 1013 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 QRICH1Q2TAL8 776 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 GMCL1P1Q8NEA9 526 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 PYM1Q9BRP8 204 aaKnown RBP19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 TMEM39BQ9GZU3 492 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 IFNKQ9P0W0 207 aa19.65■□□□□ 0.74
PCDHGC3-205ENST00000617641 R3HDM1Q15032 1099 aaKnown RBP19.64■□□□□ 0.74
PCDHGC3-205ENST00000617641 CIAPIN1Q6FI81 312 aa19.64■□□□□ 0.74
PCDHGC3-205ENST00000617641 MTRQ99707 1265 aa19.64■□□□□ 0.74
PCDHGC3-205ENST00000617641 A0A1W2PRG0 241 aa19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 NFKBIEO00221 500 aa19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 FMR1Q06787 632 aaKnown RBP eCLIP19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 CDC37Q16543 378 aaPredicted RBP19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 C17orf53Q8N3J3 647 aaPredicted RBP19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 MTMR14Q8NCE2 650 aa19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 CUL5Q93034 780 aa19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 XPO4Q9C0E2 1151 aaKnown RBP19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 BLZF1Q9H2G9 400 aa19.64■□□□□ 0.73
PCDHGC3-205ENST00000617641 PYCARDQ9ULZ3 195 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms