RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 GIMAP6Q6P9H5 292 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 ELMSAN1Q6PJG2 1045 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 ZBED2Q9BTP6 218 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 BOLA2Q9H3K6 86 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 BATF3Q9NR55 127 aa10.14□□□□□ -0.79
COL12A1-211ENST00000615798 TMA7Q9Y2S6 64 aaKnown RBP10.14□□□□□ -0.79
COL12A1-211ENST00000615798 LMTK2Q8IWU2 1503 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 CCDC13Q8IYE1 715 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 SYBUQ9NX95 663 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 CDV3Q9UKY7 258 aaKnown RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 PPME1Q9Y570 386 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ZCCHC11Q5TAX3 1644 aaKnown RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 KIF22Q14807 665 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 CFAP221Q4G0U5 840 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 VWA3BQ502W6 1294 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 NUTM2GQ5VZR2 741 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 NXNQ6DKJ4 435 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 LRP2BPQ9P2M1 347 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 BZW2Q9Y6E2 419 aaKnown RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 CDC40O60508 579 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 NT5C2P49902 561 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 GNAQP50148 359 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 AOPEPQ8N6M6 819 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ATP5HO75947 161 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 BCL2L12Q9HB09 334 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ZNF148Q9UQR1 794 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 KRT74Q7RTS7 529 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 FERMT3Q86UX7 667 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ANKRD2Q9GZV1 360 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 F6X3S4 739 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 OSBPL9Q96SU4 736 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 SERPINI1Q99574 410 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 AATFQ9NY61 560 aaKnown RBP eCLIP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ZGPATQ8N5A5 531 aaKnown RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 FAM129AQ9BZQ8 928 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 GSTA4O15217 222 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 PDHA1P08559 390 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 TPP2P29144 1249 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 PDE4BQ07343 736 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 ITGB3BPQ13352 177 aaPredicted RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 STX12Q86Y82 276 aa10.13□□□□□ -0.79
COL12A1-211ENST00000615798 CNOT10Q9H9A5 744 aaKnown RBP10.13□□□□□ -0.79
COL12A1-211ENST00000615798 STXBP3O00186 592 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 GNGT2O14610 69 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 MUM1L1Q5H9M0 696 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 OSBPL1AQ9BXW6 950 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 WDR70Q9NW82 654 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 METAP2P50579 478 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 RBM8AQ9Y5S9 174 aaKnown RBP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 MYH11P35749 1972 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 BICDL1Q6ZP65 573 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 PANK2Q9BZ23 570 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 SNX5Q9Y5X3 404 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 GUCY1A3Q02108 690 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 KAZNQ674X7 775 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 SCYL3Q8IZE3 742 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 TNIP2Q8NFZ5 429 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 FAM8A1Q9UBU6 413 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 CEP152O94986 1710 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 PTCH1Q13635 1447 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 PSMA7O14818 248 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 RTL9Q8NET4 1388 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 RGS20O76081 388 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 GJC1P36383 396 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 SND1Q7KZF4 910 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 EXOC4Q96A65 974 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 CDC5LQ99459 802 aaKnown RBP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 CARD6Q9BX69 1037 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 LAMB3Q13751 1172 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 TSC22D1Q15714 1073 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 CYP26C1Q6V0L0 522 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 TRPC5Q9UL62 973 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 CCDC78A2IDD5 438 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 DIAPH2O60879 1101 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 TUBA8Q9NY65 449 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 MPP6Q9NZW5 540 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 ARHGAP26Q9UNA1 814 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 LRRIQ3A6PVS8 624 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-211ENST00000615798 GOLGA8MH3BSY2 632 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 TMCC1O94876 653 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 TTLL11Q8NHH1 800 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 ZBTB9Q96C00 473 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 OLFM1Q99784 485 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 NEUROG2Q9H2A3 272 aa10.12□□□□□ -0.79
COL12A1-211ENST00000615798 IDH1O75874 414 aaKnown RBP10.11□□□□□ -0.79
COL12A1-211ENST00000615798 C19orf60Q96EN9 201 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 ING2Q9H160 280 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 TMOD2Q9NZR1 351 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 ZNF189O75820 626 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-211ENST00000615798 H0Y626 953 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 SGSM2O43147 1006 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 C17orf50Q8WW18 174 aa10.11□□□□□ -0.79
COL12A1-211ENST00000615798 PDCD10Q9BUL8 212 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms